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Report for CCDS37168.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37168.1 Public Mus musculus 15 Rtl6 23 108 98 CCDS HistoryNCBI Gene:223732Re-query CCDS DB by CCDS ID:37168.1Re-query CCDS DB by GeneID:223732See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37168.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069476.4 ENSMUSP00000069947.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069476.4Link to Ensembl Protein Viewer:ENSMUSP00000069947.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000069476Re-query CCDS DB by Protein ID:ENSMUSP00000069947
Original member Current member NCBI NM_177630.4 NP_808298.2 Accepted alive Link to Nucleotide Sequence:NM_177630.4Link to Protein Sequence:NP_808298.2Re-query CCDS DB by Nucleotide ID:NM_177630Re-query CCDS DB by Protein ID:NP_808298Link to BLAST:NP_808298.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808298.2 243 Q505G4 243 100% 0 0

Chromosomal Locations for CCDS 37168.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84556462 84557193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGGTCCAACCTCGGACCTCCAAAACTGAAAGCCCAGCCTCTGCCCCTGGTGCCAGCGCTCAGATGGATG
ACGTAGTTGACACCCTGACCTCTCTGCGCCTCACCAACTCCGCGCTGAGGCGCGAGGCCTCCACACTGAG
GGCGGAGAAGGCCAACCTCACCAACATGCTGGAGAGTGTGATGGCCGAACTAACTCTGCTGCGCACCCGA
GCGCGCATCCCTGGCGCTCTACAGATTACTCCACCTATCTCTGCCATCACCTCCAATGGGACCCGACCCA
TGACCACGCCACCCACCTCACTGCCTGAACCCTTCTCAGGAGACCCTGGACAGTTGGCAGGGTTCCTGAT
GCAGATGGACAGGTTCATGATTTTTCAAGCCTCCCGCTTCCCCGGTGAAGCCGAGAGAGTGGCCTTCCTG
GTATCCCGTCTGACTGGGGAGGCGGAGAAGTGGGCCATCCCCCACATGCAACCAGACAGCCCTTTGCGAA
ACAATTACCAGGGGTTTCTGGCTGAGCTCCGCAGAACCTACAAGTCCCCGCTGAGGCACTCAAGGCGAGC
ACAAATCCGGAAGACATCCGCGTCCAATAGGGCTGTGCGGGAGCGAGAGCGGGAGCGCCAGATGTTGTGT
CGCCAACTGGCCGCAGCTGGCACAGGATCCTGCCCGGTGCATCCAGCCTCCAACGGGACCAATCCCGCAC
CAGCCTTGCCCTCTCGTGGCCGGAACCTTTAA

Translation (243 aa):
MVQPRTSKTESPASAPGASAQMDDVVDTLTSLRLTNSALRREASTLRAEKANLTNMLESVMAELTLLRTR
ARIPGALQITPPISAITSNGTRPMTTPPTSLPEPFSGDPGQLAGFLMQMDRFMIFQASRFPGEAERVAFL
VSRLTGEAEKWAIPHMQPDSPLRNNYQGFLAELRRTYKSPLRHSRRAQIRKTSASNRAVRERERERQMLC
RQLAAAGTGSCPVHPASNGTNPAPALPSRGRNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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