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Report for CCDS37420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37420.1 Public Mus musculus 16 Zbtb21 23 108 98 CCDS HistoryNCBI Gene:114565Re-query CCDS DB by CCDS ID:37420.1Re-query CCDS DB by GeneID:114565See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37420.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063605.14 ENSMUSP00000068283.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063605.14Link to Ensembl Protein Viewer:ENSMUSP00000068283.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000063605Re-query CCDS DB by Protein ID:ENSMUSP00000068283
Original member Current member NCBI NM_001081684.2 NP_001075153.1 Accepted alive Link to Nucleotide Sequence:NM_001081684.2Link to Protein Sequence:NP_001075153.1Re-query CCDS DB by Nucleotide ID:NM_001081684Re-query CCDS DB by Protein ID:NP_001075153Link to BLAST:NP_001075153.1

Chromosomal Locations for CCDS 37420.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 97949881 97953081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3201 nt):
ATGGAGGGACTGCTGCATTACATCAACCCAGCACATGCTATCTCTCTGCTCAGTGCCCTCAATGAGGAGC
GCCTCAAGGGACAGCTGTGTGACGTGCTCCTGATTGTTGGGGACCAGAAATTCCGAGCTCATAAGAACGT
CTTGGCTGCCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATAAGGAGAACGAGGCACAGACTGTCTTT
CAGCTGGACTTCTGTGAGCCTGACGCTTTTGACAACGTTCTGAACTACATTTACTCTTCTTCCCTTTTTG
TGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAGCTGGGGTATAGCCTTGGTATCTCCTTCCTGACCAACAT
CGTTGCCAAAGCCCCTCAGGCTCCTTTTCCAGCCTGTCCCAACAGGAAAAGAGTGCCAGTGGAAGATGAT
GAAACCAGCTCTCAAAAGCGAAGTGTCATTGTGTGTCAGGGCAGAAGTGAAGTGCCAGGGAAAGCCAGTG
GTCCAGCCATGCAGGACCTCAGCCATACTGCCCGGGCCTCCCCCAGTGCTTCAGTCAAGACCACCATCAG
TAAGCCACATGTGGCCAAGCCGCCAGAGCAGCTTCATAGTCTGCCCTTAACTGAAAAGAGCTGGACAAAG
GATAGTGCTGCAGTATATGCAAAGTCTCTGGAACAGGCTGGGGCTTTGGATGATCCTAATAGGGGCAGTT
TGGTAAAGAGAAATACAGTCCTGCCCCCAAAGCCTTCACAGGACAGGGAGGCCACAGATGATAAACCAGG
GGTGAGCAGCCAGCTTCCCAAGGGGAAAGCTATAGAGCTGGCTCTGAAGAGACCACGGCCCCCTGTTCTG
TCTCTTCATAGCTCATCAGAGACTCCATATCTCCTAAAAGAAACTAGCAAAGGAGGCGGTCAGGGAGAGG
ATAGGAACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCCCTTCTGGTGGGCCTGCTTCTGCAAACCA
GAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCTCCTCAGGCGGTCACTGTCTATGGACAGCCAGGTT
CCTGTTTACTCCCCCTCCATAGATTTGAAGTCATCCCAGGGATCATCCACAGCGGCAAATGAGGCACCGG
GTAGTGTGTTCTGTTCGATGTCTCAAAAGTCATCTTTAAAAGATTGCAGTGAAAAAAAAGCTCTGGATGA
CAGGCCTCAAGTGCTCCAGCCTCATCGCCTCAGGTCCTTTAGTGCTTCCCAGTCAACAGACAGGGAGGAA
GCCTCCCCTGTGACTGAGGTACGCATTAAGACGGAACCCAGCAGCCCACTGTCAGACCCCTCAGACATCA
TCCGGGTCACTGTGGGAGGAGACGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTACGAG
AGACCTGCCCCTCAAAACAGAGGAAGACCAGAGAGATATGAGCAGACTCCCAGCAAAGAGAAGGTTCCAG
ACAGACAGAAGGTCACCCTTGAAGAAGGCAAAGGCAAATGAACACGGGCCTGCTGTCTCAGAAGAGAACT
GTGAAGAGGGCAGGAGCCCTCCTTCCCTTGACAGCAACTTCCCAGATTCTGACTTAAACAGAGAGGAGTT
TGGTGAGTTGGAGGGGACGAGACCAAACAAAAAATTTAAATGCAAACATTGCCTTAAGATTTTTAGATCA
ACTGCGGGTCTTCACCGCCATGTTAACATGTACCATAACCCAGAGAAGCCTTACGCTTGTGACATCTGTC
ACAAGAGGTTTCACACCAACTTCAAAGTGTGGACACACTGTCAGACCCAACACGGCATAGTGAAGAACCC
ATCGCCAGCCTCTAGTTCCCATGCAGTTTTGGATGAGAAATTCCAAAGAAAGCTGATTGACATAGTGAGA
GAGAGGGAGATTAAGAAGGCCCTGATCATTAAGCTGAGGCGCAGCAAGCCTGGCTTCCAGGGACAGAGTA
GCTCCCCAGCACAGCAAGTCATCAAGAGGAACTTGCGCTCCCGAGCCAAAGGGGCCTACATTTGTGCCTA
CTGTGGCAAGGCATACCGCTTTCTCTCTCAGTTTAAGCAGCACATAAAGATGCACCCAGGAGAGAGGCCC
CTCGGAGTAAGCAGAGCTGCTAAGCCAAAAGAGCGGGCTCTGGCACGCGCGGTAGAGAACAAGGAGGTTT
ACCCGTGCCGCCTCTGTAATGCTAAGCTCTCTTCTCTTCTAGAGCAAGGCAACCACGAGCGCTTGTGCCG
GAACGCCACCGTTTGCCCTTACTGCAGCCTCAGGTTCTTCTCTCCCGCACTGAAGCAGGAACATGAGGAC
AGGTGTGAGTACAAAAAGCTGACTTGCCTGGAGTGCATGCGCACCTTCAAGTCCTCCTTCAGCATCTGGC
GGCACCAGGTAGAAGTGCATAACCAGAACAACATGGCTTTAGCAGAGAACTTCGCCCTGGCCACCCTGGA
CCACAACGGTGAAGTGGCAGCCGCTTCCAGGCCTCAGACTGAGCCCAGCAAGGTAAACCATGTGGCCACT
CCAAAAGAGGATACAGCATTTAGCGACTCTTCAGAGCAAGTGAACTTTGATTCTGAGGATTCCTCCTGCC
TCCCTGAAGACTTGAGTCTTTCAAAGCAACTGAAAGTCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCAGA
GGAGGAGGCTCCTGAGGCTAGTGCAGCTCCCAGGGAGGCTGGCCCCAGCAAGGAGACCGGCCTATGGCCC
TGTGAGAAATGCGGAAAGATGTTCACGGCACACAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGTTCTG
TGAAGCCCTTCATCTGCCACGTATGCTACAAAGCCTTCCGTACCAACTTCCGACTCTGGAGTCACTTCCA
GACCCACATGTCTCAGGCTACAGAGGAGCCTGTGCAGAAAGAATCAGAGGTGTGTCCTGTGCCCACAAAC
TCCCCCTCCCCACCACCTCTGCCACCTCCGCCACCCTTGCCCAAGATTCAGCCCCTGGAGCCAGACAGCC
CCACAGGCCTGCCTGAGAACCCAACCCCAGCTACAGAGAAGCTGTTTGCACCCCAGGAGTCAGATACCCT
CTTCTACCACGCCCCACCCCTTTCAGCAATCACATTTAAAAGACAGTTCATGTGCAAGCTCTGCCATAGG
ACATTCAAGACGGCCTTCAGTCTTTGGAGTCATGAGCAGACACACAATTAA

Translation (1066 aa):
MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKENEAQTVF
QLDFCEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPACPNRKRVPVEDD
ETSSQKRSVIVCQGRSEVPGKASGPAMQDLSHTARASPSASVKTTISKPHVAKPPEQLHSLPLTEKSWTK
DSAAVYAKSLEQAGALDDPNRGSLVKRNTVLPPKPSQDREATDDKPGVSSQLPKGKAIELALKRPRPPVL
SLHSSSETPYLLKETSKGGGQGEDRNLLYYSKLGLVVPSGGPASANQSIDRSGPLVKSLLRRSLSMDSQV
PVYSPSIDLKSSQGSSTAANEAPGSVFCSMSQKSSLKDCSEKKALDDRPQVLQPHRLRSFSASQSTDREE
ASPVTEVRIKTEPSSPLSDPSDIIRVTVGGDAAAAAVAAAAAAAATRDLPLKTEEDQRDMSRLPAKRRFQ
TDRRSPLKKAKANEHGPAVSEENCEEGRSPPSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLKIFRS
TAGLHRHVNMYHNPEKPYACDICHKRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEKFQRKLIDIVR
EREIKKALIIKLRRSKPGFQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRFLSQFKQHIKMHPGERP
LGVSRAAKPKERALARAVENKEVYPCRLCNAKLSSLLEQGNHERLCRNATVCPYCSLRFFSPALKQEHED
RCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMALAENFALATLDHNGEVAAASRPQTEPSKVNHVAT
PKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEASAAPREAGPSKETGLWP
CEKCGKMFTAHKQLERHQELLCSVKPFICHVCYKAFRTNFRLWSHFQTHMSQATEEPVQKESEVCPVPTN
SPSPPPLPPPPPLPKIQPLEPDSPTGLPENPTPATEKLFAPQESDTLFYHAPPLSAITFKRQFMCKLCHR
TFKTAFSLWSHEQTHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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