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Report for CCDS37420.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
37420.1 |
Public |
Mus musculus |
16 |
Zbtb21 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:114565](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:37420.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:114565](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 16 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 37420.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000063605.14 |
ENSMUSP00000068283.7 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000063605.14](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000068283.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000063605](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000068283](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001081684.2 |
NP_001075153.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001081684.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001075153.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001081684](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001075153](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001075153.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 37420.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3201 nt): ATGGAGGGACTGCTGCATTACATCAACCCAGCACATGCTATCTCTCTGCTCAGTGCCCTCAATGAGGAGC GCCTCAAGGGACAGCTGTGTGACGTGCTCCTGATTGTTGGGGACCAGAAATTCCGAGCTCATAAGAACGT CTTGGCTGCCAGCAGTGAGTACTTCCAGAGTTTATTCACGAATAAGGAGAACGAGGCACAGACTGTCTTT CAGCTGGACTTCTGTGAGCCTGACGCTTTTGACAACGTTCTGAACTACATTTACTCTTCTTCCCTTTTTG TGGAGAAGGGCAGCCTTGCTGCTGTGCAGGAGCTGGGGTATAGCCTTGGTATCTCCTTCCTGACCAACAT CGTTGCCAAAGCCCCTCAGGCTCCTTTTCCAGCCTGTCCCAACAGGAAAAGAGTGCCAGTGGAAGATGAT GAAACCAGCTCTCAAAAGCGAAGTGTCATTGTGTGTCAGGGCAGAAGTGAAGTGCCAGGGAAAGCCAGTG GTCCAGCCATGCAGGACCTCAGCCATACTGCCCGGGCCTCCCCCAGTGCTTCAGTCAAGACCACCATCAG TAAGCCACATGTGGCCAAGCCGCCAGAGCAGCTTCATAGTCTGCCCTTAACTGAAAAGAGCTGGACAAAG GATAGTGCTGCAGTATATGCAAAGTCTCTGGAACAGGCTGGGGCTTTGGATGATCCTAATAGGGGCAGTT TGGTAAAGAGAAATACAGTCCTGCCCCCAAAGCCTTCACAGGACAGGGAGGCCACAGATGATAAACCAGG GGTGAGCAGCCAGCTTCCCAAGGGGAAAGCTATAGAGCTGGCTCTGAAGAGACCACGGCCCCCTGTTCTG TCTCTTCATAGCTCATCAGAGACTCCATATCTCCTAAAAGAAACTAGCAAAGGAGGCGGTCAGGGAGAGG ATAGGAACTTGCTCTACTACTCTAAGCTAGGGCTGGTGGTCCCTTCTGGTGGGCCTGCTTCTGCAAACCA GAGCATTGACAGAAGTGGCCCACTAGTGAAAAGCCTCCTCAGGCGGTCACTGTCTATGGACAGCCAGGTT CCTGTTTACTCCCCCTCCATAGATTTGAAGTCATCCCAGGGATCATCCACAGCGGCAAATGAGGCACCGG GTAGTGTGTTCTGTTCGATGTCTCAAAAGTCATCTTTAAAAGATTGCAGTGAAAAAAAAGCTCTGGATGA CAGGCCTCAAGTGCTCCAGCCTCATCGCCTCAGGTCCTTTAGTGCTTCCCAGTCAACAGACAGGGAGGAA GCCTCCCCTGTGACTGAGGTACGCATTAAGACGGAACCCAGCAGCCCACTGTCAGACCCCTCAGACATCA TCCGGGTCACTGTGGGAGGAGACGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCTACGAG AGACCTGCCCCTCAAAACAGAGGAAGACCAGAGAGATATGAGCAGACTCCCAGCAAAGAGAAGGTTCCAG ACAGACAGAAGGTCACCCTTGAAGAAGGCAAAGGCAAATGAACACGGGCCTGCTGTCTCAGAAGAGAACT GTGAAGAGGGCAGGAGCCCTCCTTCCCTTGACAGCAACTTCCCAGATTCTGACTTAAACAGAGAGGAGTT TGGTGAGTTGGAGGGGACGAGACCAAACAAAAAATTTAAATGCAAACATTGCCTTAAGATTTTTAGATCA ACTGCGGGTCTTCACCGCCATGTTAACATGTACCATAACCCAGAGAAGCCTTACGCTTGTGACATCTGTC ACAAGAGGTTTCACACCAACTTCAAAGTGTGGACACACTGTCAGACCCAACACGGCATAGTGAAGAACCC ATCGCCAGCCTCTAGTTCCCATGCAGTTTTGGATGAGAAATTCCAAAGAAAGCTGATTGACATAGTGAGA GAGAGGGAGATTAAGAAGGCCCTGATCATTAAGCTGAGGCGCAGCAAGCCTGGCTTCCAGGGACAGAGTA GCTCCCCAGCACAGCAAGTCATCAAGAGGAACTTGCGCTCCCGAGCCAAAGGGGCCTACATTTGTGCCTA CTGTGGCAAGGCATACCGCTTTCTCTCTCAGTTTAAGCAGCACATAAAGATGCACCCAGGAGAGAGGCCC CTCGGAGTAAGCAGAGCTGCTAAGCCAAAAGAGCGGGCTCTGGCACGCGCGGTAGAGAACAAGGAGGTTT ACCCGTGCCGCCTCTGTAATGCTAAGCTCTCTTCTCTTCTAGAGCAAGGCAACCACGAGCGCTTGTGCCG GAACGCCACCGTTTGCCCTTACTGCAGCCTCAGGTTCTTCTCTCCCGCACTGAAGCAGGAACATGAGGAC AGGTGTGAGTACAAAAAGCTGACTTGCCTGGAGTGCATGCGCACCTTCAAGTCCTCCTTCAGCATCTGGC GGCACCAGGTAGAAGTGCATAACCAGAACAACATGGCTTTAGCAGAGAACTTCGCCCTGGCCACCCTGGA CCACAACGGTGAAGTGGCAGCCGCTTCCAGGCCTCAGACTGAGCCCAGCAAGGTAAACCATGTGGCCACT CCAAAAGAGGATACAGCATTTAGCGACTCTTCAGAGCAAGTGAACTTTGATTCTGAGGATTCCTCCTGCC TCCCTGAAGACTTGAGTCTTTCAAAGCAACTGAAAGTCCAAGTCAAAGAGGAGCCTGTGGAGGAGGCAGA GGAGGAGGCTCCTGAGGCTAGTGCAGCTCCCAGGGAGGCTGGCCCCAGCAAGGAGACCGGCCTATGGCCC TGTGAGAAATGCGGAAAGATGTTCACGGCACACAAGCAGCTGGAGCGGCACCAGGAGCTGCTGTGTTCTG TGAAGCCCTTCATCTGCCACGTATGCTACAAAGCCTTCCGTACCAACTTCCGACTCTGGAGTCACTTCCA GACCCACATGTCTCAGGCTACAGAGGAGCCTGTGCAGAAAGAATCAGAGGTGTGTCCTGTGCCCACAAAC TCCCCCTCCCCACCACCTCTGCCACCTCCGCCACCCTTGCCCAAGATTCAGCCCCTGGAGCCAGACAGCC CCACAGGCCTGCCTGAGAACCCAACCCCAGCTACAGAGAAGCTGTTTGCACCCCAGGAGTCAGATACCCT CTTCTACCACGCCCCACCCCTTTCAGCAATCACATTTAAAAGACAGTTCATGTGCAAGCTCTGCCATAGG ACATTCAAGACGGCCTTCAGTCTTTGGAGTCATGAGCAGACACACAATTAA
Translation (1066 aa): MEGLLHYINPAHAISLLSALNEERLKGQLCDVLLIVGDQKFRAHKNVLAASSEYFQSLFTNKENEAQTVF QLDFCEPDAFDNVLNYIYSSSLFVEKGSLAAVQELGYSLGISFLTNIVAKAPQAPFPACPNRKRVPVEDD ETSSQKRSVIVCQGRSEVPGKASGPAMQDLSHTARASPSASVKTTISKPHVAKPPEQLHSLPLTEKSWTK DSAAVYAKSLEQAGALDDPNRGSLVKRNTVLPPKPSQDREATDDKPGVSSQLPKGKAIELALKRPRPPVL SLHSSSETPYLLKETSKGGGQGEDRNLLYYSKLGLVVPSGGPASANQSIDRSGPLVKSLLRRSLSMDSQV PVYSPSIDLKSSQGSSTAANEAPGSVFCSMSQKSSLKDCSEKKALDDRPQVLQPHRLRSFSASQSTDREE ASPVTEVRIKTEPSSPLSDPSDIIRVTVGGDAAAAAVAAAAAAAATRDLPLKTEEDQRDMSRLPAKRRFQ TDRRSPLKKAKANEHGPAVSEENCEEGRSPPSLDSNFPDSDLNREEFGELEGTRPNKKFKCKHCLKIFRS TAGLHRHVNMYHNPEKPYACDICHKRFHTNFKVWTHCQTQHGIVKNPSPASSSHAVLDEKFQRKLIDIVR EREIKKALIIKLRRSKPGFQGQSSSPAQQVIKRNLRSRAKGAYICAYCGKAYRFLSQFKQHIKMHPGERP LGVSRAAKPKERALARAVENKEVYPCRLCNAKLSSLLEQGNHERLCRNATVCPYCSLRFFSPALKQEHED RCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMALAENFALATLDHNGEVAAASRPQTEPSKVNHVAT PKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVEEAEEEAPEASAAPREAGPSKETGLWP CEKCGKMFTAHKQLERHQELLCSVKPFICHVCYKAFRTNFRLWSHFQTHMSQATEEPVQKESEVCPVPTN SPSPPPLPPPPPLPKIQPLEPDSPTGLPENPTPATEKLFAPQESDTLFYHAPPLSAITFKRQFMCKLCHR TFKTAFSLWSHEQTHN
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