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Report for CCDS37542.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37542.1 Public Mus musculus 17 Glp1r 23 108 98 CCDS HistoryNCBI Gene:14652Re-query CCDS DB by CCDS ID:37542.1Re-query CCDS DB by GeneID:14652See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37542.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114574.2 ENSMUSP00000110221.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114574.2Link to Ensembl Protein Viewer:ENSMUSP00000110221.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114574Re-query CCDS DB by Protein ID:ENSMUSP00000110221
Original member Current member EBI ENSMUST00000236038.1 ENSMUSP00000157572.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000236038.1Link to Ensembl Protein Viewer:ENSMUSP00000157572.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000236038Re-query CCDS DB by Protein ID:ENSMUSP00000157572
Original member Current member NCBI NM_021332.2 NP_067307.2 Accepted alive Link to Nucleotide Sequence:NM_021332.2Link to Protein Sequence:NP_067307.2Re-query CCDS DB by Nucleotide ID:NM_021332Re-query CCDS DB by Protein ID:NP_067307Link to BLAST:NP_067307.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067307.2 463 O35659 463 100% 0 0

Chromosomal Locations for CCDS 37542.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30901877 30901954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30908121 30908217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30909224 30909331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30918880 30918998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30919356 30919462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30924501 30924654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30925518 30925677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30929937 30929997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30930527 30930596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30930718 30930806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30931149 30931287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30932613 30932654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30936265 30936432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGCCAGCACCCCAAGCCTCCTGCGCCTGGCGCTCCTGCTGCTCGGGGCGGTGGGCAGGGCCGGCCCCC
GCCCTCAGGGTACCACGGTGTCCCTCTCAGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCA
GCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCAACCGGACCTTTGATGACTATGCC
TGCTGGCCGGATGGGCCCCCAGGTTCCTTCGTGAATGTCAGCTGCCCCTGGTACCTGCCCTGGGCCAGTA
GTGTGCTACAAGGCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCAG
CCTGCCCTGGAGGGACCTGTCGGAGTGTGAAGAGTCTAAGCGAGGGGAGAGAAACTTTCCTGAGGAACAG
CTCCTGTCCCTGTACATTATCTACACAGTGGGGTACGCACTTTCTTTCTCCGCCTTGGTCATCGCTTCAG
CCATCCTTGTTGGCTTCAGACACTTGCACTGCACCAGGAACTACATCCACCTGAACCTGTTTGCATCCTT
CATCCTCCGAGCACTGTCCGTCTTCATCAAAGATGCTGCCCTCAAGTGGATGTATAGCACGGCTGCCCAG
CAACACCAGTGGGATGGGCTCCTCTCCTATCAGGACTCTCTAGGCTGCCGACTGGTGTTCCTGCTCATGC
AGTACTGCGTGGCAGCCAACTACTACTGGTTGCTGGTGGAAGGCGTGTATCTATACACACTGCTGGCCTT
CTCGGTGTTCTCGGAGCAGCGCATCTTCAAGCTGTATCTGAGCATAGGCTGGGGAGTTCCGCTGCTGTTC
GTTATCCCATGGGGGATTGTCAAGTATCTCTATGAGGACGAGGGCTGCTGGACTAGGAACTCCAATATGA
ACTACTGGCTCATCATCCGATTGCCCATTCTCTTTGCTATCGGCGTCAACTTTCTTATCTTCATCCGTGT
CATCTGCATAGTGGTCTCCAAACTGAAGGCTAATCTCATGTGCAAGACTGACATCAAATGCAGGCTTGCC
AAGTCCACTCTGACTCTCATCCCCCTTCTGGGGACACATGAAGTCATCTTTGCCTTTGTGATGGACGAAC
ACGCCCGAGGAACCCTACGCTTCATCAAGCTGTTCACAGAACTCTCCTTCACTTCCTTCCAGGGCTTGAT
GGTGGCTATCCTGTACTGCTTTGTCAACAATGAGGTCCAGATGGAGTTTCGGAAATGCTGGGAGCGCTGG
AGGCTGGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAGCGTCA
GCAGTGGGGCCACAGTGGGCAGCAGCGTGTACGCAGCCACCTGCCAGAGTTCCTACAGCTGA

Translation (463 aa):
MASTPSLLRLALLLLGAVGRAGPRPQGTTVSLSETVQKWREYRRQCQRFLTEAPLLATGLFCNRTFDDYA
CWPDGPPGSFVNVSCPWYLPWASSVLQGHVYRFCTAEGLWLHKDNSSLPWRDLSECEESKRGERNFPEEQ
LLSLYIIYTVGYALSFSALVIASAILVGFRHLHCTRNYIHLNLFASFILRALSVFIKDAALKWMYSTAAQ
QHQWDGLLSYQDSLGCRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSVFSEQRIFKLYLSIGWGVPLLF
VIPWGIVKYLYEDEGCWTRNSNMNYWLIIRLPILFAIGVNFLIFIRVICIVVSKLKANLMCKTDIKCRLA
KSTLTLIPLLGTHEVIFAFVMDEHARGTLRFIKLFTELSFTSFQGLMVAILYCFVNNEVQMEFRKCWERW
RLEHLNIQRDCSMKPLKCPTSSVSSGATVGSSVYAATCQSSYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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