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Report for CCDS37659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37659.1 Public Mus musculus 17 Zfp119b 23 108 98 CCDS HistoryNCBI Gene:240120Re-query CCDS DB by CCDS ID:37659.1Re-query CCDS DB by GeneID:240120See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37659.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056147.13 ENSMUSP00000058300.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056147.13Link to Ensembl Protein Viewer:ENSMUSP00000058300.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056147Re-query CCDS DB by Protein ID:ENSMUSP00000058300
Original member Current member NCBI NM_146249.4 NP_666361.1 Accepted alive Link to Nucleotide Sequence:NM_146249.4Link to Protein Sequence:NP_666361.1Re-query CCDS DB by Nucleotide ID:NM_146249Re-query CCDS DB by Protein ID:NP_666361Link to BLAST:NP_666361.1

Chromosomal Locations for CCDS 37659.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 55938553 55939993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55940929 55940989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55941186 55941312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55945172 55945174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1632 nt):
ATGGATGCAGTGACCTATGAGGATGTGCATGTAAACTTCTCTCAAGAAGAATGGGCTTTGCTGGATCCTT
CTCAGAAGAGTCTCTACAAAGATGTGATGCTGGAAACCTACTGGAACCTTACTTGTATAGGCTACAAATG
GGAAGACCACAATATTGAGGATCAACATCAGAGTTCTGGAAGACATGGAAGGTGTATCAACTGTCCCTCT
GCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGATATGTAGTCACCCCCT
TTGTGAAAAGAGGAGGTGAATGTGATACAAGTTTACAAGTACTTGGTTTTCCAGCCTCAGTGGGAATACA
TCAAAATACTGACACTGGAGAAAAGCCCTCTGTGGACAAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGT
TCACTTTGCACGTGTAGTGTGACTCACTCTATAGGAGAATGTTATGAATGCAGTCAGTGTGGTAAAGCTC
TGAGTTGTTCTCTTCAGAGACATGACCAAACTCATATGGGAAAAGGAAGTGATAAATGTGAGCCAAGTAG
TAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGACGGCCTATAATGAAGAGGACCTCTATGTG
TGGAATCAATGTGGTAAATCCTCTTTACAGCCACACCGAAGAACTCATTTGGGAATGAAATCCTGTGAAT
ATAATCATGAAGATAAACTCATTTCACATCAGAATTGTAATCAAGTAGGTAGAACTAATACTAGAGACAC
AAAGCATGACTATCATCAATGGGGTAAAGCCTTTACATATCCCAGTTATCTTCAAATATATGAAAGAATT
CATACTGAAGAGAAACCCTATGAATGCAGTCAATGTGGTAGAGCCTTTACATGTCATAGTACTCTTCAAA
TCCATGAAAGAATTCATACTGGAGAGAAACCCTATAAATGCAATCAGTGTGGTAAAACCTTTGCATGTAA
GAGGTATCTTCAAATCCATGAAAAAATTCATACTGGAGAGAAACCCTATAAATGTAATCAGTGTGGTAAG
GCCTTTGCATGCAATAGTTATCTTCAAATCCATGAAAGAATTCATACTGGTGAGAAACCCTATAAATGTA
GTCAGTGTGGTAAAGCCTTTGCATGCAATAGTTATCTTCAAATGCATGAAAGAATTCATACTGGTGAGAA
ACCCTATAAATGCAATCAGTGTGGGAAAGCCTTTGCATGTAACAGTAATCTTCAAAAGCATGAAAGAACA
CATACTGGAGAGAAACCCTATAAATGTAATCAATGTGGCAAAGCCTTTACATGTCATAGTACTCTTCAAA
TCCATGAAAGAATACATACTGGAGAGAAACCCTATAAATGTAATCAATGTAGTAAAGCCTTTGCACGTAA
AAGATATCTTCAAATCCATGAAAGAATTCATACTGGAGAGAAACCCTATGAATGTAATCAATGTGGTAAA
GCCTTTGCATATAGCAGTAGTCTTAACAAGCATGAAAGAACTCATACTGCAGAGAAACCCTTTGAATGTA
ATCAGTGTGGTATAGCCTTTGCATGTCTCAGTACTCTTCAAAAGCATGAAGGAATTCATACTGAAAAAAT
TCCCCAGCAATCTAAGAAATGA

Translation (543 aa):
MDAVTYEDVHVNFSQEEWALLDPSQKSLYKDVMLETYWNLTCIGYKWEDHNIEDQHQSSGRHGRCINCPS
AYGKKQCTNLFPRTIRRRYVVTPFVKRGGECDTSLQVLGFPASVGIHQNTDTGEKPSVDKESGKSPVCPG
SLCTCSVTHSIGECYECSQCGKALSCSLQRHDQTHMGKGSDKCEPSSKSLTHPRYLQIQKTAYNEEDLYV
WNQCGKSSLQPHRRTHLGMKSCEYNHEDKLISHQNCNQVGRTNTRDTKHDYHQWGKAFTYPSYLQIYERI
HTEEKPYECSQCGRAFTCHSTLQIHERIHTGEKPYKCNQCGKTFACKRYLQIHEKIHTGEKPYKCNQCGK
AFACNSYLQIHERIHTGEKPYKCSQCGKAFACNSYLQMHERIHTGEKPYKCNQCGKAFACNSNLQKHERT
HTGEKPYKCNQCGKAFTCHSTLQIHERIHTGEKPYKCNQCSKAFARKRYLQIHERIHTGEKPYECNQCGK
AFAYSSSLNKHERTHTAEKPFECNQCGIAFACLSTLQKHEGIHTEKIPQQSKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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