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Report for CCDS38063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38063.1 Public Mus musculus 2 Il36b 23 108 98 CCDS HistoryNCBI Gene:69677Re-query CCDS DB by CCDS ID:38063.1Re-query CCDS DB by GeneID:69677See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 38063.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028363.1 ENSMUSP00000028363.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028363.1Link to Ensembl Protein Viewer:ENSMUSP00000028363.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000028363Re-query CCDS DB by Protein ID:ENSMUSP00000028363
Original member Current member NCBI NM_027163.4 NP_081439.1 Accepted alive Link to Nucleotide Sequence:NM_027163.4Link to Protein Sequence:NP_081439.1Re-query CCDS DB by Nucleotide ID:NM_027163Re-query CCDS DB by Protein ID:NP_081439Link to BLAST:NP_081439.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081439.1 183 Q9D6Z6 183 100% 0 0

Chromosomal Locations for CCDS 38063.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 24154590 24154680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24155229 24155336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24158784 24158923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24159718 24159930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGATGGCTTTCCCTCCACAATCTTGTGTACATGTTCTTCCTCCAAAGAGTATTCAAATGTGGGAACCGA
ATCATAACACTATGCATGGATCCTCACAATCTCCCAGAAACTACAGGGTTCATGACTCACAACAGATGGT
ATGGGTCCTGACTGGAAATACTTTAACAGCAGTTCCTGCTAGCAACAATGTCAAGCCTGTCATTCTTAGC
TTGATAGCATGTAGAGACACGGAATTCCAAGATGTAAAGAAAGGTAATCTAGTTTTCCTGGGAATCAAGA
ACAGAAATCTCTGCTTCTGCTGTGTTGAGATGGAGGGCAAACCAACTTTGCAGCTTAAGGAAGTAGACAT
CATGAATTTGTACAAAGAGAGAAAAGCACAAAAAGCCTTTCTGTTCTATCATGGCATAGAGGGCTCCACT
TCTGTCTTTCAGTCAGTCCTCTATCCTGGCTGGTTTATAGCCACCTCTTCCATAGAAAGACAGACAATCA
TCCTCACACATCAGCGGGGTAAATTGGTTAACACTAACTTCTACATAGAGTCTGAGAAGTAA

Translation (183 aa):
MMAFPPQSCVHVLPPKSIQMWEPNHNTMHGSSQSPRNYRVHDSQQMVWVLTGNTLTAVPASNNVKPVILS
LIACRDTEFQDVKKGNLVFLGIKNRNLCFCCVEMEGKPTLQLKEVDIMNLYKERKAQKAFLFYHGIEGST
SVFQSVLYPGWFIATSSIERQTIILTHQRGKLVNTNFYIESEK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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