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Report for CCDS39529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39529.1 Public Mus musculus 6 Wbp1 23 108 98 CCDS HistoryNCBI Gene:22377Re-query CCDS DB by CCDS ID:39529.1Re-query CCDS DB by GeneID:22377See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39529.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032111.10 ENSMUSP00000032111.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032111.10Link to Ensembl Protein Viewer:ENSMUSP00000032111.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000032111Re-query CCDS DB by Protein ID:ENSMUSP00000032111
Original member Current member NCBI NM_016757.2 NP_058037.2 Accepted alive Link to Nucleotide Sequence:NM_016757.2Link to Protein Sequence:NP_058037.2Re-query CCDS DB by Nucleotide ID:NM_016757Re-query CCDS DB by Protein ID:NP_058037Link to BLAST:NP_058037.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058037.2 304 P97764-1 304 100% 0 0

Chromosomal Locations for CCDS 39529.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 83119260 83119720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83119868 83120044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83120185 83120287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83120772 83120876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83121203 83121271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGCTCGGGCCAGCAGCAGGAACAGCAGCGAAGAGGCCTGGGGGTCACTTCAGGCGCCGCAACAGCAGC
AGAGTCCGGCAGCATCTTCTCTTGAGGGAGCAATTTGGAGACGAGCTGGAACCCAGACTCGCGCCCTGGA
TACCATCCTTTATCATCCACAGCAATCCCATCTGCTTCGAGAGCTGTGCCCAGGAGTGAATACCCAGCCC
TACCTCTGTGAGACTGGTCATTGCTGTGGGGAGACTGGCTGCTGCACCTACTACTATGAACTCTGGTGGT
TCTGGCTGCTTTGGACTGTCCTCATCCTCTTTAGCTGCTGTTGTGCCTTCCGCCACCGAAGGGCTAAACT
CAGGCTGCAACAGCAACAGCGGCAGCGTGAAATCAACTTGTTGGCTTACCATGGGGCATGCCACGGGGCT
GGCCCTGTTCCAACCGGTTCACTGCTTGACCTTCGCCTCCTCAGCGCCTTCAAACCCCCAGCCTACGAGG
ATGTGGTTCACCACCCAGGCACACCGCCACCTCCTTACACTGTGGGCCCAGGCTACCCTTGGACTACTTC
CAGTGAATGCACCCGCTGCTCTTCCGAATCCAGCTGCTCTGCCCACTTGGAGGGGACAAATGTAGAAGGT
GTTTCCTCCCAGCAGAGTGCTCTCCCTCACCAGGAGGGTGAGCCCAGGGCAGGATTGAGCCCAGTTCACA
TACCCCCTTCCTGCCGCTATCGTCGCCTAACTGGTGACTCGGGTATTGAGCTCTGCCCTTGTCCTGACTC
CAGTGAAGGTGAGCCACTCAAGGAAGCGAGGGCTAGTGCCTCCCAGCCAGATCTGGAAGACCATTCCCCT
TGTGCACTGCCCCCAGATTCTGTGTCCCAAGTTCCTCCCATGGGGCTGGCTTCTAGTTGTGGGGACATCC
CATAA

Translation (304 aa):
MARASSRNSSEEAWGSLQAPQQQQSPAASSLEGAIWRRAGTQTRALDTILYHPQQSHLLRELCPGVNTQP
YLCETGHCCGETGCCTYYYELWWFWLLWTVLILFSCCCAFRHRRAKLRLQQQQRQREINLLAYHGACHGA
GPVPTGSLLDLRLLSAFKPPAYEDVVHHPGTPPPPYTVGPGYPWTTSSECTRCSSESSCSAHLEGTNVEG
VSSQQSALPHQEGEPRAGLSPVHIPPSCRYRRLTGDSGIELCPCPDSSEGEPLKEARASASQPDLEDHSP
CALPPDSVSQVPPMGLASSCGDIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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