NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS39650.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39650.1 Public Mus musculus 6 Pzp 23 108 98 CCDS HistoryNCBI Gene:11287Re-query CCDS DB by CCDS ID:39650.1Re-query CCDS DB by GeneID:11287See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39650.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112132.7 ENSMUSP00000107760.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112132.7Link to Ensembl Protein Viewer:ENSMUSP00000107760.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112132Re-query CCDS DB by Protein ID:ENSMUSP00000107760
Original member Current member NCBI NM_007376.4 NP_031402.3 Accepted alive Link to Nucleotide Sequence:NM_007376.4Link to Protein Sequence:NP_031402.3Re-query CCDS DB by Nucleotide ID:NM_007376Re-query CCDS DB by Protein ID:NP_031402Link to BLAST:NP_031402.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031402.3 1495 Q61838 1495 100% 0 0

Chromosomal Locations for CCDS 39650.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 128483704 128483726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128484864 128484905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128485558 128485660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128486118 128486186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128486893 128486983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128487403 128487533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128487881 128488099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128488906 128489147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128489682 128489859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128490019 128490093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128490523 128490679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128491165 128491255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128491496 128491672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128492157 128492240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128494428 128494479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128494708 128494829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128495193 128495319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128495900 128496128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128496579 128496753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128498959 128499046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128502176 128502340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128503473 128503622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128506736 128506878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128510345 128510408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128512156 128512383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128513736 128513897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128516073 128516182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128516816 128516930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128519392 128519515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128521101 128521185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128522016 128522184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128522740 128522760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128523777 128523829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128523970 128524123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128525115 128525298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 128526579 128526664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4488 nt):
ATGAGGAGAAACCAGCTGCCCACACCAGCTTTTCTTTTACTGTTCCTGCTTCTTCCCAGAGATGCCACCA
CAGCTACTGCAAAACCACAATATGTGGTGCTGGTCCCGTCAGAGGTCTATTCAGGAGTCCCTGAAAAGGC
CTGTGTCAGCCTCAACCATGTGAATGAGACTGTGATGCTCAGCTTAACTCTAGAGTATGCAATGCAGCAA
ACGAAGCTCCTCACAGACCAGGCTGTGGATAAGGACTCCTTCTACTGCAGCCCCTTCACGATCTCAGGTT
CACCTTTACCCTACACATTCATTACTGTGGAGATAAAAGGACCAACGCAGCGCTTCATAAAGAAGAAGTC
AATACAAATAATAAAAGCTGAGAGCCCAGTCTTTGTCCAGACAGACAAACCCATATACAAACCAGGACAG
ATAGTGAAATTCCGAGTTGTTTCTGTGGACATCAGTTTTCGCCCGTTGAATGAAACGTTCCCTGTCGTTT
ATATTGAGACTCCCAAGAGGAACCGAATTTTTCAATGGCAAAATATCCATCTGGCAGGAGGACTCCACCA
GCTCTCTTTCCCACTGTCTGTTGAGCCAGCTCTGGGTATCTACAAGGTTGTAGTGCAGAAGGACTCAGGG
AAGAAAATAGAACACTCCTTTGAGGTGAAGGAATACGTTTTACCCAAATTTGAGGTGATAATAAAAATGC
AGAAGACTATGGCTTTCCTGGAAGAGGAACTTCCTATAACTGCTTGTGGCGTATACACATATGGAAAGCC
TGTTCCCGGTCTGGTGACATTGAGAGTGTGCAGAAAATATTCACGATACCGCTCCACCTGCCATAACCAA
AACTCAATGAGTATCTGTGAAGAATTCAGCCAACAGGCAGATGATAAAGGATGTTTCAGACAAGTTGTAA
AAACCAAAGTATTCCAGCTCAGACAAAAAGGCCACGACATGAAGATAGAGGTGGAAGCCAAAATCAAAGA
GGAAGGAACAGGAATAGAACTAACTGGTATTGGATCATGTGAAATAGCAAATGCCTTAAGCAAACTGAAA
TTTACTAAAGTAAATACAAATTACAGGCCTGGGCTACCTTTCTCTGGACAGGTTCTTCTTGTTGATGAGA
AGGGTAAACCAATCCCCAACAAAAACATAACTTCCGTCGTGTCTCCACTTGGGTACCTGTCCATTTTTAC
TACGGATGAGCATGGCTTGGCTAACATTTCCATTGACACTTCCAACTTCACAGCTCCGTTTTTGAGAGTT
GTGGTCACCTACAAGCAGAACCATGTCTGCTATGATAACTGGTGGCTTGATGAATTTCACACACAGGCAG
ACCATTCTGCAACTCTAGTCTTTTCTCCAAGCCAGAGTTATATTCAACTTGAACTTGTTTTTGGTACTTT
GGCCTGTGGGCAAACTCAGGAGATTCGGATACACTACCTCTTGAATGAAGATATCATGAAGAATGAAAAA
GACTTAACCTTTTACTATCTGATCAAAGCAAGGGGAAGCATCTTCAACTTAGGAAGCCATGTGTTGTCGC
TTGAACAAGGAAACATGAAAGGAGTCTTTTCCCTCCCAATTCAAGTGGAGCCAGGCATGGCTCCCGAGGC
TCAGCTGCTCATTTATGCTATTTTACCTAATGAAGAACTTGTCGCTGATGCTCAGAATTTTGAAATCGAG
AAGTGTTTTGCCAACAAGGTAAATTTGAGTTTCCCATCAGCACAGAGCCTGCCAGCCTCTGACACCCACC
TGAAGGTCAAAGCCGCGCCTCTGTCCCTCTGTGCCCTCACTGCAGTAGACCAGAGTGTGCTGCTACTGAA
GCCCGAAGCCAAGCTCTCACCTCAGTCAATCTACAATTTGCTGCCAGGAAAGACTGTCCAGGGTGCCTTC
TTTGGTGTCCCAGTGTACAAAGACCATGAGAACTGCATCAGCGGAGAAGACATCACTCACAATGGGATCG
TGTACACGCCAAAGCACTCTCTGGGCGATAATGATGCACACAGCATTTTTCAGTCTGTAGGAATAAATAT
TTTTACCAACTCCAAAATCCACAAACCACGCTTTTGTCAAGAGTTTCAACACTATCCGGCAATGGGAGGA
GTGGCACCTCAAGCCTTAGCTGTGGCTGCTTCAGGCCCAGGATCCAGCTTCAGAGCAATGGGCGTGCCGA
TGATGGGGTTGGACTACTCTGATGAAATTAATCAGGTGGTGGAAGTAAGAGAGACAGTGCGGAAGTACTT
CCCTGAGACCTGGATCTGGGACCTGGTGCCACTGGACGTATCCGGGGACGGTGAATTGGCGGTAAAGGTC
CCCGACACCATCACTGAGTGGAAGGCCAGTGCATTCTGCTTGTCTGGAACCACTGGCCTTGGCCTCTCCT
CCACCATCTCCCTTCAAGCCTTCCAGCCCTTCTTCTTGGAGCTCACTCTCCCATACTCTGTGGTGCGAGG
GGAAGCCTTTACCCTCAAAGCCACCGTGCTCAATTACATGTCTCACTGCATTCAGATCCGAGTGGACCTA
GAGATTTCTCCTGATTTCCTGGCAGTCCCAGTGGGGGGCCATGAAAACTCTCATTGCATCTGTGGAAATG
AAAGGAAAACCGTGTCCTGGGCTGTGACCCCAAAGTCGCTGGGGGAGGTGAACTTCACAGCTACCGCAGA
AGCCTTGCAGTCTCCAGAATTGTGTGGCAATAAGTTGACAGAAGTGCCAGCCCTTGTACACAAGGACACT
GTGGTGAAGTCCGTAATAGTTGAGCCTGAAGGAATTGAGAAGGAGCAAACGTACAACACACTGTTATGCC
CACAAGATACTGAGTTACAAGATAATTGGTCACTGGAGCTTCCACCCAATGTGGTTGAAGGATCTGCCAG
GGCTACACATTCCGTTTTGGGTGATATACTGGGCTCTGCAATGCAAAACCTCCAGAATCTTCTCCAGATG
CCCTATGGCTGTGGGGAACAAAACATGGTCCTTTTTGTCCCTAACATCTATGTTCTGAACTATCTGAACG
AGACACAGCAGCTGACAGAGGCGATCAAGTCCAAAGCCATTAACTACCTCATCAGTGGGTACCAGAGGCA
GCTGAACTATCAGCACAGTGATGGCTCGTACAGCACATTCGGGAACCATGGTGGTGGCAACACTCCGGGA
AATACTTGGCTCACTGCGTTTGTGCTCAAGGCCTTTGCTCAAGCTCAGTCGCACATCTTTATAGAGAAGA
CACACATCACAAATGCTTTCAACTGGCTCTCCATGAAACAAAAGGAGAATGGCTGTTTCCAACAGTCTGG
ATATCTGCTTAACAATGCGATGAAGGGTGGTGTGGATGATGAAGTGACTCTCTCTGCCTACATCACCATT
GCTCTGCTGGAGATGCCTCTGCCTGTCACGCACAGTGCTGTGCGAAATGCTCTATTTTGCCTGGAAACGG
CCTGGGCCTCCATCTCACAGAGCCAGGAAAGTCATGTCTATACCAAGGCATTGCTGGCCTATGCCTTCGC
CCTGGCAGGAAACAAGGCCAAGAGAAGCGAACTGCTTGAATCCCTAAACAAAGATGCTGTGAAGGAAGAG
GATTCGCTGCACTGGCAACGCCCTGGGGATGTTCAGAAAGTGAAGGCCTTATCTTTCTATCAACCTCGGG
CCCCTTCTGCCGAAGTGGAGATGACAGCTTACGTGCTTCTCGCCTATCTAACCTCTGAGTCTTCCCGGCC
CACACGGGACCTGTCTTCATCAGACCTGTCCACAGCATCCAAGATTGTGAAGTGGATCAGCAAGCAACAA
AACTCCCACGGGGGCTTCTCCTCCACTCAGGATACAGTGGTGGCTCTCCAAGCCCTCTCCAAATATGGAG
CTGCCACTTTTACGAGAAGTCAGAAAGAAGTGTTGGTCACCATCGAGTCTTCAGGGACCTTCTCTAAGAC
TTTCCATGTTAACAGTGGCAATCGCCTGCTGCTGCAGGAAGTCAGGCTGCCAGATCTGCCCGGAAATTAC
GTCACCAAAGGGTCAGGATCAGGATGTGTGTACCTTCAGACATCTCTAAAGTACAACATCCTCCCAGTGG
CAGATGGAAAAGCACCCTTCGCTCTGCAAGTCAACACTCTCCCCCTAAACTTTGACAAGGCAGGAGATCA
CAGAACATTCCAGATTCGCATCAACGTAAGCTACACTGGAGAACGACCCAGCTCCAACATGGTCATTGTT
GATGTGAAGATGGTATCAGGCTTCATACCTATGAAGCCATCCGTGAAAAAGCTCCAAGACCAGCCTAACA
TTCAGAGGACTGAAGTGAACACCAACCATGTTCTAATCTACATTGAAAAGCTAACCAATCAAACCCTCGG
TTTCTCCTTCGCGGTGGAACAAGACATCCCAGTAAAGAACTTAAAACCAGCCCCCATAAAAGTCTATGAT
TATTATGAGACAGATGAATTCACCGTTGAAGAATACAGTGCCCCTTTCAGTGATGGCTCTGAACAAGGAA
ATGCTTAA

Translation (1495 aa):
MRRNQLPTPAFLLLFLLLPRDATTATAKPQYVVLVPSEVYSGVPEKACVSLNHVNETVMLSLTLEYAMQQ
TKLLTDQAVDKDSFYCSPFTISGSPLPYTFITVEIKGPTQRFIKKKSIQIIKAESPVFVQTDKPIYKPGQ
IVKFRVVSVDISFRPLNETFPVVYIETPKRNRIFQWQNIHLAGGLHQLSFPLSVEPALGIYKVVVQKDSG
KKIEHSFEVKEYVLPKFEVIIKMQKTMAFLEEELPITACGVYTYGKPVPGLVTLRVCRKYSRYRSTCHNQ
NSMSICEEFSQQADDKGCFRQVVKTKVFQLRQKGHDMKIEVEAKIKEEGTGIELTGIGSCEIANALSKLK
FTKVNTNYRPGLPFSGQVLLVDEKGKPIPNKNITSVVSPLGYLSIFTTDEHGLANISIDTSNFTAPFLRV
VVTYKQNHVCYDNWWLDEFHTQADHSATLVFSPSQSYIQLELVFGTLACGQTQEIRIHYLLNEDIMKNEK
DLTFYYLIKARGSIFNLGSHVLSLEQGNMKGVFSLPIQVEPGMAPEAQLLIYAILPNEELVADAQNFEIE
KCFANKVNLSFPSAQSLPASDTHLKVKAAPLSLCALTAVDQSVLLLKPEAKLSPQSIYNLLPGKTVQGAF
FGVPVYKDHENCISGEDITHNGIVYTPKHSLGDNDAHSIFQSVGINIFTNSKIHKPRFCQEFQHYPAMGG
VAPQALAVAASGPGSSFRAMGVPMMGLDYSDEINQVVEVRETVRKYFPETWIWDLVPLDVSGDGELAVKV
PDTITEWKASAFCLSGTTGLGLSSTISLQAFQPFFLELTLPYSVVRGEAFTLKATVLNYMSHCIQIRVDL
EISPDFLAVPVGGHENSHCICGNERKTVSWAVTPKSLGEVNFTATAEALQSPELCGNKLTEVPALVHKDT
VVKSVIVEPEGIEKEQTYNTLLCPQDTELQDNWSLELPPNVVEGSARATHSVLGDILGSAMQNLQNLLQM
PYGCGEQNMVLFVPNIYVLNYLNETQQLTEAIKSKAINYLISGYQRQLNYQHSDGSYSTFGNHGGGNTPG
NTWLTAFVLKAFAQAQSHIFIEKTHITNAFNWLSMKQKENGCFQQSGYLLNNAMKGGVDDEVTLSAYITI
ALLEMPLPVTHSAVRNALFCLETAWASISQSQESHVYTKALLAYAFALAGNKAKRSELLESLNKDAVKEE
DSLHWQRPGDVQKVKALSFYQPRAPSAEVEMTAYVLLAYLTSESSRPTRDLSSSDLSTASKIVKWISKQQ
NSHGGFSSTQDTVVALQALSKYGAATFTRSQKEVLVTIESSGTFSKTFHVNSGNRLLLQEVRLPDLPGNY
VTKGSGSGCVYLQTSLKYNILPVADGKAPFALQVNTLPLNFDKAGDHRTFQIRINVSYTGERPSSNMVIV
DVKMVSGFIPMKPSVKKLQDQPNIQRTEVNTNHVLIYIEKLTNQTLGFSFAVEQDIPVKNLKPAPIKVYD
YYETDEFTVEEYSAPFSDGSEQGNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH