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Report for CCDS39833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39833.1 Public Mus musculus 7 Ceacam10 23 108 98 CCDS HistoryNCBI Gene:26366Re-query CCDS DB by CCDS ID:39833.1Re-query CCDS DB by GeneID:26366See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 39833.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038069.8 ENSMUSP00000037036.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038069.8Link to Ensembl Protein Viewer:ENSMUSP00000037036.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000038069Re-query CCDS DB by Protein ID:ENSMUSP00000037036
Original member Current member NCBI NM_007675.4 NP_031701.3 Accepted alive Link to Nucleotide Sequence:NM_007675.4Link to Protein Sequence:NP_031701.3Re-query CCDS DB by Nucleotide ID:NM_007675Re-query CCDS DB by Protein ID:NP_031701Link to BLAST:NP_031701.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031701.3 265 Q61400 265 99.6226% 0 1

Chromosomal Locations for CCDS 39833.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24777276 24777339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24778126 24778485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24780870 24781229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24784463 24784476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGGAGCTGGCCTCAGCACATCTCCACAAAGGGCAGGTTCCCTGGGTTGGACTACTGCTCACAGCCTCAC
TTTTAACTTACTGGAGCCCTGCCACTACTGCCCAAGTCACCGTTGAGGCTGTGCCGCCCAACGTTACTGC
AGACAACAATGTTCTTCTACTTGTTCACAATCTGCCGCAGACGCTCCGAGTCTTTTACTGGTACAAGGGA
AACAGTGGGGCTGGACACAATGAAATTGGACGATTTGTAACATCCATTAATAGGAGTAAAATGGGGCTTG
CACACAGCGGCAGAGAGACAATATATAGCAATGGATCCCTGTTCTTCCAAAGTGTCACCAAGAATGATGA
GGGAGTCTACACATTATATATGCTAGATCAAAACTTTGAAATTACTCCGATTTCTGTGCGATTTCATGTA
CACCCCTCACTTTTACCCTCCTTGAGCCCTCCCACCACTGGCCAAGTCACCGTTGAGGCTGTGCGGCCCA
ACGTTGCCGAAGGGGAAAACGTTCTTCTACTTGTTCACAATCTGCCACGGACGCTCCGAGCAATTTACTG
GTACAGGGGAACCACTGCGGGTGAAAGAAATGAAATTGCACGATTTATAACAGCCTCCAATAAGATTATA
TTGGGGCCTGCACACAGCGACAGAGAGATCATATACAACAATGGATCCCTGTTCTTCCAAGGTGTCACCA
AGAATGATGAGGGAGCCTACGCACTAGATATGCTATTTCAAAACTTCGATCATACCCTAATGCCTGTGCA
ATTTAATGTTCACGCTAAAAAGCAGTAG

Translation (265 aa):
MELASAHLHKGQVPWVGLLLTASLLTYWSPATTAQVTVEAVPPNVTADNNVLLLVHNLPQTLRVFYWYKG
NSGAGHNEIGRFVTSINRSKMGLAHSGRETIYSNGSLFFQSVTKNDEGVYTLYMLDQNFEITPISVRFHV
HPSLLPSLSPPTTGQVTVEAVRPNVAEGENVLLLVHNLPRTLRAIYWYRGTTAGERNEIARFITASNKII
LGPAHSDREIIYNNGSLFFQGVTKNDEGAYALDMLFQNFDHTLMPVQFNVHAKKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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