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Report for CCDS41153.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
41153.1 |
Public |
Mus musculus |
X |
Col4a6 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 41153.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000101205.2 |
ENSMUSP00000098765.2 |
Accepted |
alive |
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NCBI |
NM_053185.2 |
NP_444415.2 |
Updated |
not alive |
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NCBI |
NM_053185.3 |
NP_444415.2 |
Accepted |
alive |
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Chromosomal Locations for CCDS 41153.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5076 nt): ATGCACCCTGGATTGTGGCTGTTCCTGGTTTCCTTATGCTTGACCAAAGAACTGGCAGAATCGGGACAGA AGATGTCCTATGGAAAGCCATGTGGGAGCCGAGATTGCCATGGAGTCTGTACATGCTTTCCTGAGAAAGG AGCAAGAGGGCACCCTGGACCAATTGGAACTCAAGGTCCAGCCGGTCCGGAAGGGTTTACTGGTCCAACT GGTTTATCAGGTTTGAAAGGAGAAAGAGGCTCCCCAGGCCCTCTGGGACCATATGGATCAAAAGGAGATA AGGGTCCCATTGGAGTTCCTGGCTTTGTTGGCATCAGTGGTATTCCGGGCCACCCTGGACAGCCAGGTCC AAGAGGTCCACCTGGCCCAGATGGCTGTAATGGAACTCAAGGAGCTGTTGGATTTCCAGGCCCTGATGGC TACCCTGGGATTTTAGGACCACCTGGGCTGCCTGGTCACAAAGGTGCCAAAGGAGAGCCTGTTCCTTTTC AAGGCAGCATTACAGGAATAAGGGGAGATCCTGGGCTGCCTGGACTAGATGGAATCCCTGGTCCATCAGG ATCCTCCGGCTCTCCTGGAGATGCAGGACCCATAGGACCACCAGGCTTACAAGGTCCCCCAGGCCTCCCC GGACTTCCCGGTCCTGAGGGAAATATGGGGTTAGGTTTCCAAGGAGAAAAAGGAGTCAAGGGGGATGTTG GCCTCCCTGGCCCTGCAGGACCACCTCCATCTACTGGGGAACTAGAATTCATGGGATTCCCCAAAGGAAA GAAAGGTTCCAAGGGTGAGCCAGGGCCTCCAGGTTTCCCAGGAATGAGTGGCCCTCCAGGTGTCCCGGAA TTTGGATCTACTGGAGAAAAAGGAGAAAAGGGGATTCTTGGTTTGCCAGGACCTAGGGGTCCCATGGGTT CAGAAGGAATACAAGGCCATCCAGGGAGACAGGGAAAGAAGGGGACTTCAGGTTTTCCTGGGATTAACGG GTTCCCAGGAATTAAGGGTGAAAAGGGAGACATTGGTGTTCGAGGCCCAGACAGTTTCACTGATGCAGAT GGCGCTGTGATCTCAGGTTATCCTGGAGACCCTGGTGTGCTGGGCCTTCCAGGCCTTAGAGGAGATGAAG GCGTCCAAGGCCAACGTGGCCCTTCTGGAACCCCTGGCCTCCCATCATTAACAGGTCTTCCAGGTGCCCT AGGGCCTCAGGGATTTCCTGGCCTGAAAGGAGACCAAGGAAACTCAGGACGTACCACCTTTGGAGAAGCT GGCCTACCTGGCAGGGTTGGTTTACCAGGTTTACCAGGCCTGCCAGGCCCATCAGGCCCACCTGGTCGCA CATTTGAGACTGGACATCTGTCCAACATAGAGCCTGGGTTCCCTGGTCTCCAAGGAGAACAAGGTCCAAA AGGACATCAAGGCCTCAAAGGAGTAAAAGGAGACTCTGGTTTTTGTGCTTGTGAAGGTGGTGCCCCCAAC ATTGGACCACATGGGGAACCAGGTCTGCCTGGGATACAAGGTCCCATTGGTCTACAGGGTTTTAAGGGGA CTAAAGGAGATCCAGGCTCAAGGGGAGCATCTGGTCCTGCAGGGACGCCAGGGCTATTTGGACCTAGAGG TCAGACTGGCCTCAAAGGAAAGAAAGGAGAACCAACTGTCAGTAGAGGATCAAAAATGTCAGGGGACAAA GGTGACCCTGGTCCTCAGGGTACCCCAGGTTTGGCAGGAACTCCGGGCAAGGATGGAAGACCAGGTTTAC CAGGCCTCCCAGGCATTCAGGGAGATGGTGGGTCTGGCTTCCCAGGTGAAAGAGGGTTACCAGGACTTCC TGGTGAAAAAGGCCATGATGGTCCAATTGGACCACCAGGAATTGGGCTGCCAGGACCTCCTGGGCCCCGT GGACTTCCTGGAGATAAAGGAGTAGATGGGTTACCAGGGCAACAAGGCCTCCGTGGAGCTCAAGGAGTCA CCTTGCCTTGTATCATTCCTGGGTCATATGGTCCATCAGGATTTCCTGGAGCTCCTGGATTCCCAGGCTC TAAGGGAGCTCGGGGCCTCCCTGGAATTCCAGGCAAGCCTGGCACTCACGGAAGCAAAGGAGGGCCTGGG AGTCCAGGGTTAATGCATCTCCCAGGATTGCCAGGGTTTCCTGGAGTTCGTGGGGAGAAGGGATTACCTG GGTTTCCTGGGCTTCCTGGAAAAGATGGCTACCCTGGGAAAGCTGGCAGTCCAGGGTTACCAGGTTTCAA GGGAGCTGCTGGTGACATATTTGGTGCTGAAAATGGTGCTTCGGGGGAGCAAGGCCTACAGGGATTGCCA GGGGACAAAGGATTTCCTGGAGACTCTGGCCTTCCAGGACCCAAGGGTTTGAATGGGAAACCTGGTATGC TAGGCCCCAAGGGTGAGCGGGGCAACCCTGGAACATCAGGACCACCAGGACAGCCAGGACCCTCAGGGTC TACTGACCCATTTGGCATCAAGGGCACATCTGGATTCCCAGGAGCACCAGGCCTTCCAGGCATCTCAGGG CACCCTGGAAAGAAAGGTCAAAGAGGAGACATAGGTCAGCCTGGATCAACTGGAAAAAGAGGTCTACCTG GGATAAAAGGCCTTCCTGGTCCTCAAGGGTCACCTGGCTTCCTGGGGAGCCCAGGTTTGTCAGGCGTCAC TGGGTTGCCGGGCATCGAAGGCCAAAAGGGTGAAAAGGGGTCCTCTGGACCAGTAGGATTTCCTGGGTTA CCTGGTCTTCCTGGTCTTCCTGGAGCTGATGGATTAAAGGGATTTTCTGGGTCATTTGGAAAGGTGGGAC AACCTGGACAGACTGGTACTTCCGGAGAAAAAGGAGACAGAGGGGATCCAGGGCCAGTTGGCATATCTAG TCCAAGACCTCCAATGCTAAACCTTTGGTTCAAAGGAGAAAAAGGCTCTCGAGGTTCTGCTGGATCGGAT GGATTTCCTGGGCCCAGAGGTGACAAAGGAGAGCCTGGCATCCCAGGGTTACCAGGTCCACCTGGAGCTA CTGGACAAACCAATACCATCAAAGGGCTCAATGGGAGGCCAGGTTCTCCTGGATCTATGGGAAGAAGGGG ATTACCTGGCCTGAAGGGGTCTCTTGGGATTGCAGGTTTCCCAGGAATGCCAGGGAAAAGCGGTTCACAG GGGCTCACTGGGACTTCTGGCCTCCTGGGAGCAACTGGTATCCCAGGTTTAAAAGGAGATCAAGGCCAAA CACTTGGCATTTCTGGAAGCCCAGGACCCAAGGGACAGCCTGGAGAATTAGGTTTTAAAGGTGTCAAAGG AAAAGATGGACTAGTTGGTGATAGAGGTTACCCAGGAAACAAAGGTGATGGTGGAAAAGTTGGAATTACT GGAGATCCTGGCTTCCCTGGCTCCCCAGGACTTCAAGGGATTTCAGGTATGAATGGAGACCCAGGCCTCC CAGGTTCCTCTGGCCATCTGGGGTCAATTGGCCGCCCTGGACCCTCAGGCTTAATAGGACCTAAAGGATT CCCTGGAGCTCCTGGTTTACATGGACTGAATGGACTTCCAGGCACCAAGGGCACCCATGGCACTCCAGGA GCCAGTATCACTGGTGTTCCTGGGCCGGCTGGCCTGCCTGGTCCCAAAGGGGAAAGGGGAGTGCCAGGAA TTGTCATCGGAGATCCAGGGAAACAAGGTTCAAAGGGACAAAAAGGTGACCAAGGTTCCCCAGGTCTTCA AGGTCCTGCTGGTACCCCTGGAGCCCCAGGCATCTCCTTGCCCTCAGTCATAGCAGGACAGCCTGGTGAC CCTGGGCGGCCAGGCCTAGATGGAGAACGAGGCCGCCCAGGCCCTCCAGGTCCTCCAGGTCCCCCTGGGC CATCCTCAGATCAAGGCGATCCTGGAGACTCTGGCTTCCCTGGGATTCCAGGCCTTCAAGGGTTCAAGGG AAACCAAGGACTTCCAGGTTTCTCTGGCCTCTCTGGAGAGCTAGGGCTAAAGGGCATGAGAGGGGAACCT GGCCTCATGGGGACTCCTGGCAAGATCGGGCAACCAGGAGACCCAGGATTTCCTGGGATGAAGGGGAAGG CGGGGCCAAGAGGCTTTTCCGGCCCACAGGGAGCTCCAGGACACACACCAATTGCTGAAGCTATGCAGGT TCCTCCAGGACCTTTGGGTCTGCCAGGCATTGATGGTATCCCAGGCCTCATAGGAGACCCTGGGTCTCAA GGCTCTGTGGGTCTGCAAGGTTCCAAAGGCCTACCTGGCATCCCTGGTAAGGATGGCCCCAGTGGGCTTC CAGGCCCATCTGGAATCCTTGGTGATCCTGGTCTCCCTGGACTACAAGGACCTCCAGGATTTGAAGGAGC TCCGGGAAATCAGGGCCCCATTGGGCAGCCTGGGATGCCTGGGCACGGTGTGAGAGTGGGCTACACACTA GTAAAACACAGTCAGTCAGAACAGGTGCCACTATGCCCCACTGGGATGAGCCGGCTCTGGGTGGGTTACA GCTTGCTCTTCGTGGAGGGGCAGGAGAAAGCCCATAACCAGGATCTGGGATTTGCTGGCTCCTGCCTGCC CCGATTCAGCACCATGCCCTTCATATACTGCAACATCAATGAAGTGTGCCACTATGCCAGACGCAATGAT AAATCTTACTGGCTCTCCACTACTGCCCCCATTCCCATGATGCCTGTGGGCCAGACCCAGATTCCCCAGT ATATCAGCCGCTGCTCTGTATGTGAGGCACCCTCACAAGCCATTGCTGTACACAGTCAGGACATCATTGT CCCACAGTGCCCTCTGGGCTGGCACAGCCTCTGGATCGGATACTCCTTCCTCATGCACACTGCTGCTGGG GCTGAGGGTGGAGGCCAGTCCCTAGTCTCCCCTGGCTCGTGTCTTGAGGACTTCCGGGCCACTCCTTTCA TTGAGTGCAGCGGCGCCCGTGGTACATGCCACTACTTTGCCAACAAGTACAGTTTCTGGCTGACAACGGT GGAGGAGAGAGGGCAGTTTCGGGAAGAGCCCGTGTCTGAGACGCTGAAAACTGGGCAGCTTCACACCAGG GTGAGCCGCTGCCAGGTGTGTATGAAAACCCCGTAG
Translation (1691 aa): MHPGLWLFLVSLCLTKELAESGQKMSYGKPCGSRDCHGVCTCFPEKGARGHPGPIGTQGPAGPEGFTGPT GLSGLKGERGSPGPLGPYGSKGDKGPIGVPGFVGISGIPGHPGQPGPRGPPGPDGCNGTQGAVGFPGPDG YPGILGPPGLPGHKGAKGEPVPFQGSITGIRGDPGLPGLDGIPGPSGSSGSPGDAGPIGPPGLQGPPGLP GLPGPEGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGVPE FGSTGEKGEKGILGLPGPRGPMGSEGIQGHPGRQGKKGTSGFPGINGFPGIKGEKGDIGVRGPDSFTDAD GAVISGYPGDPGVLGLPGLRGDEGVQGQRGPSGTPGLPSLTGLPGALGPQGFPGLKGDQGNSGRTTFGEA GLPGRVGLPGLPGLPGPSGPPGRTFETGHLSNIEPGFPGLQGEQGPKGHQGLKGVKGDSGFCACEGGAPN IGPHGEPGLPGIQGPIGLQGFKGTKGDPGSRGASGPAGTPGLFGPRGQTGLKGKKGEPTVSRGSKMSGDK GDPGPQGTPGLAGTPGKDGRPGLPGLPGIQGDGGSGFPGERGLPGLPGEKGHDGPIGPPGIGLPGPPGPR GLPGDKGVDGLPGQQGLRGAQGVTLPCIIPGSYGPSGFPGAPGFPGSKGARGLPGIPGKPGTHGSKGGPG SPGLMHLPGLPGFPGVRGEKGLPGFPGLPGKDGYPGKAGSPGLPGFKGAAGDIFGAENGASGEQGLQGLP GDKGFPGDSGLPGPKGLNGKPGMLGPKGERGNPGTSGPPGQPGPSGSTDPFGIKGTSGFPGAPGLPGISG HPGKKGQRGDIGQPGSTGKRGLPGIKGLPGPQGSPGFLGSPGLSGVTGLPGIEGQKGEKGSSGPVGFPGL PGLPGLPGADGLKGFSGSFGKVGQPGQTGTSGEKGDRGDPGPVGISSPRPPMLNLWFKGEKGSRGSAGSD GFPGPRGDKGEPGIPGLPGPPGATGQTNTIKGLNGRPGSPGSMGRRGLPGLKGSLGIAGFPGMPGKSGSQ GLTGTSGLLGATGIPGLKGDQGQTLGISGSPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDGGKVGIT GDPGFPGSPGLQGISGMNGDPGLPGSSGHLGSIGRPGPSGLIGPKGFPGAPGLHGLNGLPGTKGTHGTPG ASITGVPGPAGLPGPKGERGVPGIVIGDPGKQGSKGQKGDQGSPGLQGPAGTPGAPGISLPSVIAGQPGD PGRPGLDGERGRPGPPGPPGPPGPSSDQGDPGDSGFPGIPGLQGFKGNQGLPGFSGLSGELGLKGMRGEP GLMGTPGKIGQPGDPGFPGMKGKAGPRGFSGPQGAPGHTPIAEAMQVPPGPLGLPGIDGIPGLIGDPGSQ GSVGLQGSKGLPGIPGKDGPSGLPGPSGILGDPGLPGLQGPPGFEGAPGNQGPIGQPGMPGHGVRVGYTL VKHSQSEQVPLCPTGMSRLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRND KSYWLSTTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDIIVPQCPLGWHSLWIGYSFLMHTAAG AEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERGQFREEPVSETLKTGQLHTR VSRCQVCMKTP
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