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Report for CCDS41470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41470.1 Public Homo sapiens 1 MIA3 24 110 108 CCDS HistoryNCBI Gene:375056Re-query CCDS DB by CCDS ID:41470.1Re-query CCDS DB by GeneID:375056See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344922.10 ENSP00000340900.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344922.10Link to Ensembl Protein Viewer:ENSP00000340900.5Re-query CCDS DB by Nucleotide ID:ENST00000344922Re-query CCDS DB by Protein ID:ENSP00000340900
Original member Current member NCBI NM_198551.4 NP_940953.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198551.4Link to Protein Sequence:NP_940953.2Re-query CCDS DB by Nucleotide ID:NM_198551Re-query CCDS DB by Protein ID:NP_940953Link to BLAST:NP_940953.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940953.2 1907 Q5JRA6-1 1907 100% 0 0

Chromosomal Locations for CCDS 41470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 222618111 222618243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222621159 222621292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222624768 222624854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222627575 222630389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222632165 222632326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222633104 222633249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222645554 222645685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222648829 222648850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222650292 222650380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222650634 222650711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222650793 222650903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222651977 222652048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222652228 222652332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222653008 222653130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222653228 222653339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222654243 222654298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222654389 222654479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222654655 222654793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222658722 222658823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222659453 222659513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222659622 222659657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222659734 222659801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222659906 222660006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222660177 222660314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222662056 222662124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222662253 222662332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222663998 222664148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 222665309 222665619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5724 nt):
ATGGCTGCGGCGCCTGGGCTGCTCGTCTGGCTGCTCGTGCTCCGGCTGCCCTGGCGGGTGCCGGGCCAGC
TGGACCCCAGCACTGGCCGGCGGTTCTCGGAGCACAAACTCTGCGCGGACGACGAATGCAGCATGTTAAT
GTACCGCGGTGAGGCTCTTGAAGATTTCACAGGCCCGGATTGTCGTTTTGTGAATTTTAAAAAAGGTGAT
CCTGTATATGTTTACTATAAACTGGCAAGAGGATGGCCTGAAGTTTGGGCTGGAAGTGTTGGACGCACTT
TTGGATATTTTCCAAAAGATTTAATCCAGGTAGTTCATGAATATACCAAAGAAGAGCTACAAGTTCCAAC
AGATGAGACGGATTTTGTTTGTTTTGATGGAGGAAGAGATGATTTTCATAATTATAATGTAGAAGAACTT
TTAGGGTTTTTGGAACTGTACAATTCTGCAGCTACAGATTCTGAGAAAGCTGTAGAAAAAACTTTACAGG
ATATGGAAAAAAACCCTGAATTATCTAAGGAAAGGGAACCTGAACCTGAACCAGTAGAAGCCAACTCAGA
GGAAAGTGATAGTGTATTCTCAGAAAACACTGAGGATCTTCAGGAACAGTTTACAACTCAGAAGCACCAC
TCCCATGCAAACAGCCAAGCAAATCATGCTCAGGGAGAGCAGGCTTCATTTGAATCTTTTGAAGAAATGC
TGCAAGATAAACTAAAAGTGCCAGAAAGTGAAAACAACAAAACCAGCAATAGTTCTCAGGTCTCAAATGA
ACAGGATAAGATTGATGCCTATAAACTTTTGAAAAAAGAAATGACTCTAGACTTGAAAACCAAATTTGGC
TCAACAGCTGATGCACTTGTATCTGATGATGAGACAACCAGACTCGTTACTTCATTAGAAGATGATTTTG
ATGAGGAATTGGATACTGAGTATTATGCAGTTGGAAAGGAAGATGAGGAGAACCAAGAAGACTTTGATGA
GTTGCCATTACTTACCTTTACAGATGGGGAAGATATGAAAACTCCAGCAAAGTCTGGCGTTGAGAAATAT
CCAACAGATAAAGAGCAGAATTCAAATGAAGAGGACAAGGTTCAGCTAACTGTGCCCCCTGGCATCAAAA
ATGATGATAAAAATATACTAACAACCTGGGGGGACACTATCTTCTCTATTGTCACAGGAGGTGAAGAAAC
AAGAGATACGATGGATTTAGAGAGCTCTAGTTCAGAGGAAGAAAAAGAAGATGATGATGATGCATTAGTC
CCAGATAGCAAACAGGGGAAACCACAGTCAGCAACAGATTATAGTGACCCTGACAATGTAGATGATGGTC
TTTTTATTGTAGACATTCCTAAAACAAATAATGACAAAGAAGTAAACGCAGAACATCACATTAAAGGAAA
AGGGAGGGGAGTTCAGGAATCCAAGAGGGGCCTGGTACAAGATAAGACAGAATTAGAGGATGAAAATCAA
GAAGGCATGACTGTGCACAGTTCTGTTCACAGCAATAACCTCAACTCTATGCCAGCTGCTGAAAAGGGTA
AAGACACATTAAAATCAGCTTATGATGATACAGAAAATGACCTAAAAGGAGCAGCTATTCATATCTCAAA
AGGAATGCTCCACGAAGAAAAGCCTGGAGAGCAGATTTTGGAAGGTGGCTCAGAGAGTGAATCTGCACAG
AAAGCTGCAGGGAATCAAATGAATGACAGAAAGATTCAACAGGAATCCCTGGGTAGTGCACCACTCATGG
GAGATGACCACCCTAACGCATCCAGAGACAGTGTGGAGGGAGACGCTTTGGTAAATGGGGCCAAACTGCA
CACGCTTTCAGTGGAGCATCAACGTGAGGAATTGAAAGAGGAATTAGTTCTTAAAACTCAAAACCAACCT
AGATTCTCCTCTCCAGATGAGATTGATTTGCCCAGAGAACTGGAAGACGAGGTTCCCATTCTGGGAAGAA
ATCTTCCCTGGCAACAAGAAAGAGATGTGGCTGCCACAGCCAGTAAGCAAATGAGTGAGAAGATAAGGCT
CTCTGAGGGAGAAGCCAAAGAGGACTCCTTGGATGAAGAGTTTTTTCATCACAAGGCAATGCAGGGCACA
GAGGTAGGACAGACAGACCAAACTGACAGCACAGGAGGACCAGCTTTCCTTTCTAAAGTAGAAGAGGATG
ATTATCCCTCTGAAGAACTACTAGAGGATGAAAACGCTATAAATGCAAAACGGTCTAAAGAAAAAAACCC
TGGGAATCAGGGCAGGCAGTTTGATGTTAATCTGCAAGTCCCTGACAGAGCAGTTTTAGGGACCATTCAT
CCAGATCCAGAAATTGAAGAAAGCAAGCAAGAAACTAGTATGATTTTGGATAGCGAAAAAACAAGTGAGA
CTGCTGCCAAAGGGGTCAACACAGGAGGCAGGGAACCAAATACAATGGTGGAAAAAGAACGCCCTCTGGC
AGATAAGAAAGCACAGAGACCATTTGAACGAAGTGACTTTTCTGACAGCATAAAAATTCAGACTCCAGAA
TTAGGTGAAGTGTTTCAGAATAAAGATTCTGATTATCTGAAGAACGACAACCCTGAGGAACATCTGAAGA
CCTCAGGGCTTGCAGGGGAGCCTGAGGGAGAACTCTCAAAAGAGGACCATGAGAACACAGAGAAGTACAT
GGGCACAGAAAGCCAGGGGTCTGCTGCTGCAGAACCTGAAGATGACTCGTTCCACTGGACTCCACATACA
AGTGTAGAGCCAGGGCATAGTGACAAGAGGGAGGACTTACTTATCATAAGCAGCTTCTTTAAAGAACAAC
AGTCTTTGCAGCGGTTCCAGAAGTACTTTAATGTCCATGAGCTGGAAGCCTTGCTACAAGAAATGTCATC
AAAACTGAAGTCAGCGCAGCAGGAGAGCCTGCCCTATAATATGGAAAAAGTCCTAGATAAGGTCTTCCGT
GCTTCTGAGTCACAAATTCTGAGCATAGCAGAAAAAATGCTTGATACTCGTGTGGCTGAAAATAGAGATC
TGGGAATGAACGAAAATAACATATTTGAAGAGGCTGCAGTGCTTGATGACATTCAAGACCTCATCTATTT
TGTCAGGTACAAGCACTCCACAGCAGAGGAGACAGCCACACTGGTGATGGCACCACCTCTAGAGGAAGGC
TTGGGTGGAGCAATGGAAGAGATGCAACCACTGCATGAAGATAATTTCTCACGAGAGAAGACAGCAGAAC
TTAATGTGCAGGTTCCTGAAGAACCCACCCACTTGGACCAACGTGTGATTGGGGACACTCATGCCTCAGA
AGTGTCACAGAAGCCAAATACTGAGAAAGACCTGGACCCAGGGCCAGTTACAACAGAAGACACTCCTATG
GATGCTATTGATGCAAACAAGCAACCAGAGACAGCCGCCGAAGAGCCGGCAAGTGTCACACCTTTGGAAA
ACGCAATCCTTCTAATATATTCATTCATGTTTTATTTAACTAAGTCGCTAGTTGCTACATTGCCTGATGA
TGTTCAGCCTGGGCCTGATTTTTATGGACTGCCATGGAAACCTGTATTTATCACTGCCTTCTTGGGAATT
GCTTCGTTTGCCATTTTCTTATGGAGAACTGTCCTTGTTGTGAAGGATAGAGTATATCAAGTCACGGAAC
AGCAAATTTCTGAGAAGTTGAAGACTATCATGAAAGAAAATACAGAACTTGTACAAAAATTGTCAAATTA
TGAACAGAAGATCAAGGAATCAAAGAAACATGTTCAGGAAACCAGGAAACAAAATATGATTCTCTCTGAT
GAAGCAATTAAATATAAGGATAAAATCAAGACACTTGAAAAAAATCAGGAAATTCTGGATGACACAGCTA
AAAATCTTCGTGTTATGCTAGAATCTGAGAGAGAACAGAATGTCAAGAATCAGGACTTGATATCAGAAAA
CAAGAAATCTATAGAGAAGTTAAAGGATGTTATTTCAATGAATGCCTCAGAATTTTCAGAGGTTCAGATT
GCACTTAATGAAGCTAAGCTTAGTGAAGAGAAGGTGAAGTCTGAATGCCATCGGGTTCAAGAAGAAAATG
CTAGGCTTAAGAAGAAAAAAGAGCAGTTGCAGCAGGAAATCGAAGACTGGAGTAAATTACATGCTGAGCT
CAGTGAGCAAATCAAATCATTTGAGAAGTCTCAGAAAGATTTGGAAGTAGCTCTTACTCACAAGGATGAT
AATATTAATGCTTTGACTAACTGCATTACACAGTTGAATCTGTTAGAGTGTGAATCTGAATCTGAGGGTC
AAAATAAAGGTGGAAATGATTCAGATGAATTAGCAAATGGAGAAGTGGGAGGTGACCGGAATGAGAAGAT
GAAAAATCAAATTAAGCAGATGATGGATGTCTCTCGGACACAGACTGCAATATCGGTAGTTGAAGAGGAT
CTAAAGCTTTTACAGCTTAAGCTAAGAGCCTCCGTGTCCACTAAATGTAACCTGGAAGACCAGGTAAAGA
AATTGGAAGATGACCGCAACTCACTACAAGCTGCCAAAGCTGGACTGGAAGATGAATGCAAAACCTTGAG
GCAGAAAGTGGAGATTCTGAATGAGCTCTATCAGCAGAAGGAGATGGCTTTGCAAAAGAAACTGAGTCAA
GAAGAGTATGAACGGCAAGAAAGAGAGCACAGGCTGTCAGCTGCAGATGAAAAGGCAGTTTCGGCTGCAG
AGGAAGTAAAAACTTACAAGCGGAGAATTGAAGAAATGGAGGATGAATTACAGAAGACAGAGCGGTCATT
TAAAAACCAGATCGCTACCCATGAGAAGAAAGCTCATGAAAACTGGCTCAAAGCTCGTGCTGCAGAAAGA
GCTATAGCTGAAGAGAAAAGGGAAGCTGCCAATTTGAGACACAAATTATTAGAATTAACACAAAAGATGG
CAATGCTGCAAGAAGAACCTGTGATTGTAAAACCAATGCCAGGAAAACCAAATACACAAAACCCTCCACG
GAGAGGTCCTCTGAGCCAGAATGGCTCTTTTGGCCCATCCCCTGTGAGTGGTGGAGAATGCTCCCCTCCA
TTGACAGTGGAGCCACCCGTGAGACCTCTCTCTGCTACTCTCAATCGAAGAGATATGCCTAGAAGTGAAT
TTGGATCAGTGGACGGGCCTCTACCTCATCCTCGATGGTCAGCTGAGGCATCTGGGAAACCCTCTCCTTC
TGATCCAGGATCTGGTACAGCTACCATGATGAACAGCAGCTCAAGAGGCTCTTCCCCTACCAGGGTACTC
GATGAAGGCAAGGTTAATATGGCTCCAAAAGGGCCCCCTCCTTTCCCAGGAGTCCCTCTCATGAGCACCC
CCATGGGAGGCCCTGTACCACCACCCATTCGATATGGACCACCACCTCAGCTCTGCGGACCTTTTGGGCC
TCGGCCACTTCCTCCACCCTTTGGCCCTGGTATGCGTCCACCACTAGGCTTAAGAGAATTTGCACCAGGC
GTTCCACCAGGAAGACGGGACCTGCCTCTCCACCCTCGGGGATTTTTACCTGGACACGCACCATTTAGAC
CTTTAGGTTCACTTGGCCCAAGAGAGTACTTTATTCCTGGTACCCGATTACCACCCCCAACCCATGGTCC
CCAGGAATACCCACCACCACCTGCTGTAAGAGACTTACTGCCGTCAGGCTCTAGAGATGAGCCTCCACCT
GCCTCTCAGAGCACTAGCCAGGACTGTTCACAGGCTTTAAAACAGAGCCCATAA

Translation (1907 aa):
MAAAPGLLVWLLVLRLPWRVPGQLDPSTGRRFSEHKLCADDECSMLMYRGEALEDFTGPDCRFVNFKKGD
PVYVYYKLARGWPEVWAGSVGRTFGYFPKDLIQVVHEYTKEELQVPTDETDFVCFDGGRDDFHNYNVEEL
LGFLELYNSAATDSEKAVEKTLQDMEKNPELSKEREPEPEPVEANSEESDSVFSENTEDLQEQFTTQKHH
SHANSQANHAQGEQASFESFEEMLQDKLKVPESENNKTSNSSQVSNEQDKIDAYKLLKKEMTLDLKTKFG
STADALVSDDETTRLVTSLEDDFDEELDTEYYAVGKEDEENQEDFDELPLLTFTDGEDMKTPAKSGVEKY
PTDKEQNSNEEDKVQLTVPPGIKNDDKNILTTWGDTIFSIVTGGEETRDTMDLESSSSEEEKEDDDDALV
PDSKQGKPQSATDYSDPDNVDDGLFIVDIPKTNNDKEVNAEHHIKGKGRGVQESKRGLVQDKTELEDENQ
EGMTVHSSVHSNNLNSMPAAEKGKDTLKSAYDDTENDLKGAAIHISKGMLHEEKPGEQILEGGSESESAQ
KAAGNQMNDRKIQQESLGSAPLMGDDHPNASRDSVEGDALVNGAKLHTLSVEHQREELKEELVLKTQNQP
RFSSPDEIDLPRELEDEVPILGRNLPWQQERDVAATASKQMSEKIRLSEGEAKEDSLDEEFFHHKAMQGT
EVGQTDQTDSTGGPAFLSKVEEDDYPSEELLEDENAINAKRSKEKNPGNQGRQFDVNLQVPDRAVLGTIH
PDPEIEESKQETSMILDSEKTSETAAKGVNTGGREPNTMVEKERPLADKKAQRPFERSDFSDSIKIQTPE
LGEVFQNKDSDYLKNDNPEEHLKTSGLAGEPEGELSKEDHENTEKYMGTESQGSAAAEPEDDSFHWTPHT
SVEPGHSDKREDLLIISSFFKEQQSLQRFQKYFNVHELEALLQEMSSKLKSAQQESLPYNMEKVLDKVFR
ASESQILSIAEKMLDTRVAENRDLGMNENNIFEEAAVLDDIQDLIYFVRYKHSTAEETATLVMAPPLEEG
LGGAMEEMQPLHEDNFSREKTAELNVQVPEEPTHLDQRVIGDTHASEVSQKPNTEKDLDPGPVTTEDTPM
DAIDANKQPETAAEEPASVTPLENAILLIYSFMFYLTKSLVATLPDDVQPGPDFYGLPWKPVFITAFLGI
ASFAIFLWRTVLVVKDRVYQVTEQQISEKLKTIMKENTELVQKLSNYEQKIKESKKHVQETRKQNMILSD
EAIKYKDKIKTLEKNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFSEVQI
ALNEAKLSEEKVKSECHRVQEENARLKKKKEQLQQEIEDWSKLHAELSEQIKSFEKSQKDLEVALTHKDD
NINALTNCITQLNLLECESESEGQNKGGNDSDELANGEVGGDRNEKMKNQIKQMMDVSRTQTAISVVEED
LKLLQLKLRASVSTKCNLEDQVKKLEDDRNSLQAAKAGLEDECKTLRQKVEILNELYQQKEMALQKKLSQ
EEYERQEREHRLSAADEKAVSAAEEVKTYKRRIEEMEDELQKTERSFKNQIATHEKKAHENWLKARAAER
AIAEEKREAANLRHKLLELTQKMAMLQEEPVIVKPMPGKPNTQNPPRRGPLSQNGSFGPSPVSGGECSPP
LTVEPPVRPLSATLNRRDMPRSEFGSVDGPLPHPRWSAEASGKPSPSDPGSGTATMMNSSSRGSSPTRVL
DEGKVNMAPKGPPPFPGVPLMSTPMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLREFAPG
VPPGRRDLPLHPRGFLPGHAPFRPLGSLGPREYFIPGTRLPPPTHGPQEYPPPPAVRDLLPSGSRDEPPP
ASQSTSQDCSQALKQSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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