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Report for CCDS41644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41644.1 Public Homo sapiens 11 FNBP4 24 110 108 CCDS HistoryNCBI Gene:23360Re-query CCDS DB by CCDS ID:41644.1Re-query CCDS DB by GeneID:23360See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263773.10 ENSP00000263773.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263773.10Link to Ensembl Protein Viewer:ENSP00000263773.5Re-query CCDS DB by Nucleotide ID:ENST00000263773Re-query CCDS DB by Protein ID:ENSP00000263773
Original member Current member NCBI NM_015308.5 NP_056123.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015308.5Link to Protein Sequence:NP_056123.2Re-query CCDS DB by Nucleotide ID:NM_015308Re-query CCDS DB by Protein ID:NP_056123Link to BLAST:NP_056123.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056123.2 1017 Q8N3X1-1 1017 100% 0 0

Chromosomal Locations for CCDS 41644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 47717422 47717512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47719929 47720086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47722976 47723316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47724028 47724172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47724468 47724778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47731374 47731561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47732537 47732670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47734025 47734129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47736616 47736740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47743953 47744163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47746056 47746394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47750916 47751036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47751143 47751290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47752916 47753102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47754528 47754664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47765270 47765362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47767069 47767288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3054 nt):
ATGGGGAAGAAGTCCCGGGCGGTACCCGGCCGTAGGCCCATCCTGCAACTCTCTCCGCCGGGTCCTCGGG
GCAGCACGCCGGGCCGGGACCCGGAGCCGGAACCCGACACTGAGCCGGACTCAACCGCGGCGGTCCCCAG
CCAGCCCGCCCCGTCGGCGGCGACGACCACCACCACCGCGGTGACTGCCGCCGCGGCCTCGGACGACTCG
CCTTCAGAAGATGAACAGGAAGCGGTGCAGGAGGTTCCTAGAGTTGTTCAGAATCCTCCAAAACCAGTCA
TGACCACTAGACCCACAGCTGTTAAAGCAACAGGCGGTCTATGCTTGCTTGGTGCTTATGCTGACAGTGA
TGACGATGACAATGATGTTTCCGAAAAACTAGCACAATCCAAAGAGACAAATGGAAACCAGTCAACTGAT
ATTGATAGTACATTGGCCAACTTCCTAGCGGAGATCGATGCCATAACAGCTCCTCAGCCTGCAGCTCCTG
TAGGAGCTTCTGCTCCACCTCCAACTCCACCTCGACCAGAGCCAAAGGAAGCAGCAACATCTACCCTTTC
TTCTTCTACTTCAAATGGAACAGACTCCACCCAAACATCTGGTTGGCAATATGATACTCAGTGTTCACTG
GCAGGAGTCGGAATTGAGATGGGCGATTGGCAGGAAGTCTGGGATGAGAACACGGGATGTTATTATTATT
GGAATACACAAACAAATGAAGTGACTTGGGAGTTACCCCAATATCTTGCCACACAGGTACAGGGATTACA
GCATTACCAGCCCAGTTCTGTGCCAGGTGCTGAAACTAGTTTTGTGGTAAATACAGACATATATTCTAAG
GAGAAAACGATTTCTGTTTCCAGTAGTAAAAGTGGACCAGTCATAGCCAAGCGAGAAGTTAAAAAGGAAG
TAAATGAAGGAATTCAGGCTCTCTCAAATAGTGAGGAGGAGAAGAAAGGGGTGGCAGCATCGCTGCTTGC
TCCTTTATTGCCTGAGGGAATAAAAGAAGAAGAAGAGAGATGGAGAAGAAAAGTAATTTGTAAAGAGGAG
CCAGTTTCAGAAGTAAAAGAAACAAGTACAACAGTAGAAGAAGCAACAACAATAGTAAAGCCACAGGAAA
TTATGTTGGACAATATAGAAGACCCTTCTCAGGAGGATCTTTGCAGTGTTGTCCAATCTGGAGAAAGTGA
GGAGGAAGAGGAACAAGATACCCTTGAACTGGAGCTAGTTTTGGAAAGGAAAAAAGCAGAGTTGCGAGCC
TTGGAGGAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGTTCTGATATCAGCCAGCCAGCATCTCAAG
ATGGAATGCGTAGGCTTATGTCTAAAAGAGGAAAATGGAAGATGTTTGTTCGAGCTACCAGTCCAGAATC
TACCAGTAGGAGTTCTAGTAAAACTGGACGAGATACTCCAGAAAATGGAGAAACTGCAATTGGTGCTGAA
AATTCAGAAAAAATAGATGAGAATTCAGATAAAGAGATGGAAGTAGAAGAATCTCCAGAGAAAATAAAAG
TACAGACAACACCAAAAGTAGAAGAAGAACAGGATTTGAAATTTCAGATTGGAGAACTGGCAAATACCCT
GACAAGTAAATTCGAGTTTCTAGGCATTAATAGACAATCCATCTCCAACTTTCATGTGCTGCTCTTACAG
ACTGAGACTCGAATTGCAGACTGGCGGGAAGGGGCTCTTAATGGAAACTACCTTAAACGAAAACTTCAGG
ATGCAGCAGAACAACTAAAACAGTATGAAATAAACGCCACTCCTAAAGGCTGGTCCTGCCACTGGGACAG
GGATCATAGACGGTATTTCTATGTAAACGAACAGTCGGGCGAGTCTCAGTGGGAGTTTCCAGATGGTGAA
GAGGAAGAAGAAGAAAGCCAAGCACAAGAAAATAGAGATGAGACTCTTGCCAAACAGACCTTGAAAGACA
AAACTGGCACTGATTCAAATTCAACAGAATCCTCTGAAACTTCCACAGGTTCTCTTTGTAAAGAATCCTT
TTCTGGTCAAGTTTCTTCTTCATCACTCATGCCACTTACTCCATTCTGGACCCTCCTTCAGTCAAATGTT
CCTGTGCTTCAACCTCCATTACCCTTGGAAATGCCACCACCCCCACCTCCACCTCCAGAATCACCTCCAC
CCCCTCCTCCACCACCTCCTCCTGCGGAAGATGGTGAGATCCAGGAGGTAGAGATGGAGGATGAGGGAAG
TGAGGAGCCCCCTGCCCCAGGAACAGAGGAAGATACCCCTTTGAAACCTTCAGCACAAACCACAGTTGTA
ACTAGCCAGAGTTCAGTTGATTCCACCATCTCTAGTTCTTCTTCCACTAAAGGAATAAAGAGGAAAGCTA
CAGAAATTAGCACTGCAGTGGTTCAGAGGTCAGCTACCATTGGCAGTTCTCCAGTTCTCTATAGCCAGTC
AGCTATAGCTACAGGTCACCAGGCAGCAGGGATTGGAAACCAGGCAACAGGAATTGGACATCAGACAATA
CCAGTTAGCCTTCCAGCAGCAGGAATGGGTCATCAGGCCAGAGGAATGAGCCTGCAGTCAAATTACCTTG
GACTAGCGGCAGCACCTGCAATTATGAGTTATGCAGAATGTTCTGTCCCAATTGGAGTGACTGCTCCCTC
ATTGCAGCCAGTTCAGGCCCGAGGTGCTGTGCCTACCGCTACCATTATAGAACCACCACCACCACCTCCT
CCTCCTCCTCCTCCACCACCACCAGCTCCCAAAATGCCACCACCTGAAAAGACAAAAAAAGGAAGGAAAG
ACAAGGCAAAGAAGAGTAAGACCAAAATGCCATCTTTGGTAAAAAAGTGGCAGAGTATCCAGCGTGAGTT
AGATGAAGAGGACAATTCTAGTTCCAGTGAAGAGGATCGGGAATCAACTGCACAGAAGCGAATTGAAGAG
TGGAAACAGCAGCAGCTGGTTAGTGGCATGGCAGAGAGAAATGCTAATTTTGAAGCCCTTCCTGAGGATT
GGAGAGCAAGGCTGAAGAGAAGGAAAATGGCTCCAAACACATAG

Translation (1017 aa):
MGKKSRAVPGRRPILQLSPPGPRGSTPGRDPEPEPDTEPDSTAAVPSQPAPSAATTTTTAVTAAAASDDS
PSEDEQEAVQEVPRVVQNPPKPVMTTRPTAVKATGGLCLLGAYADSDDDDNDVSEKLAQSKETNGNQSTD
IDSTLANFLAEIDAITAPQPAAPVGASAPPPTPPRPEPKEAATSTLSSSTSNGTDSTQTSGWQYDTQCSL
AGVGIEMGDWQEVWDENTGCYYYWNTQTNEVTWELPQYLATQVQGLQHYQPSSVPGAETSFVVNTDIYSK
EKTISVSSSKSGPVIAKREVKKEVNEGIQALSNSEEEKKGVAASLLAPLLPEGIKEEEERWRRKVICKEE
PVSEVKETSTTVEEATTIVKPQEIMLDNIEDPSQEDLCSVVQSGESEEEEEQDTLELELVLERKKAELRA
LEEGDGSVSGSSPRSDISQPASQDGMRRLMSKRGKWKMFVRATSPESTSRSSSKTGRDTPENGETAIGAE
NSEKIDENSDKEMEVEESPEKIKVQTTPKVEEEQDLKFQIGELANTLTSKFEFLGINRQSISNFHVLLLQ
TETRIADWREGALNGNYLKRKLQDAAEQLKQYEINATPKGWSCHWDRDHRRYFYVNEQSGESQWEFPDGE
EEEEESQAQENRDETLAKQTLKDKTGTDSNSTESSETSTGSLCKESFSGQVSSSSLMPLTPFWTLLQSNV
PVLQPPLPLEMPPPPPPPPESPPPPPPPPPPAEDGEIQEVEMEDEGSEEPPAPGTEEDTPLKPSAQTTVV
TSQSSVDSTISSSSSTKGIKRKATEISTAVVQRSATIGSSPVLYSQSAIATGHQAAGIGNQATGIGHQTI
PVSLPAAGMGHQARGMSLQSNYLGLAAAPAIMSYAECSVPIGVTAPSLQPVQARGAVPTATIIEPPPPPP
PPPPPPPPAPKMPPPEKTKKGRKDKAKKSKTKMPSLVKKWQSIQRELDEEDNSSSSEEDRESTAQKRIEE
WKQQQLVSGMAERNANFEALPEDWRARLKRRKMAPNT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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