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Report for CCDS41780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41780.1 Public Homo sapiens 12 FMNL3 24 110 108 CCDS HistoryNCBI Gene:91010Re-query CCDS DB by CCDS ID:41780.1Re-query CCDS DB by GeneID:91010See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352151.9 ENSP00000344311.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000352151.9Link to Ensembl Protein Viewer:ENSP00000344311.5Re-query CCDS DB by Nucleotide ID:ENST00000352151Re-query CCDS DB by Protein ID:ENSP00000344311
Original member Current member NCBI NM_198900.3 NP_944489.2 Accepted alive Link to Nucleotide Sequence:NM_198900.3Link to Protein Sequence:NP_944489.2Re-query CCDS DB by Nucleotide ID:NM_198900Re-query CCDS DB by Protein ID:NP_944489Link to BLAST:NP_944489.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_944489.2 976 Q8IVF7-2 976 100% 0 0

Chromosomal Locations for CCDS 41780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49645815 49645903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49646886 49647009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49647276 49647368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49647703 49647804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49648193 49648353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649029 49649158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649259 49649339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649470 49649538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49649691 49649925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49650676 49650878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651168 49651292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651382 49651450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49651933 49652212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49653226 49653327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49653725 49653874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49654192 49654302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49654910 49654984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49656404 49656497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49656823 49656899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49657082 49657190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49661966 49662049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49665832 49665908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49666127 49666207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49668471 49668554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49707055 49707180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2931 nt):
ATGGGCAACCTGGAGAGCGCCGAGGGGGTCCCGGGAGAGCCCCCCTCTGTCCCGTTGTTGCTGCCGCCCG
GCAAGATGCCGATGCCTGAGCCCTGTGAGCTGGAGGAAAGGTTCGCCCTGGTGCTGAGCTCCATGAACCT
GCCTCCAGACAAGGCCCGGCTCCTGCGGCAGTATGACAATGAGAAGAAATGGGATCTGATCTGTGACCAG
GAACGATTCCAGGTGAAGAATCCTCCCCACACTTACATTCAGAAACTCCAGAGCTTCTTGGACCCCAGTG
TAACTCGGAAGAAGTTCAGGAGGAGGGTGCAGGAGTCAACCAAAGTACTAAGGGAGCTGGAGATCTCTCT
TCGCACCAACCACATTGGGTGGGTGCGGGAATTTCTGAATGATGAAAACAAAGGCCTGGATGTACTGGTG
GATTACCTGTCCTTTGCCCAGTGTTCTGTCATGTATAGCACTCTCCCTGGGCGCAGGGCCCTGAAGAACT
CCCGCCTAGTGAGCCAGAAGGATGACGTCCACGTCTGTATCCTTTGTCTCAGAGCCATCATGAACTATCA
GTACGGATTCAACCTGGTCATGTCCCACCCCCATGCTGTCAATGAGATTGCACTTAGCCTCAATAACAAG
AATCCAAGGACCAAAGCCCTTGTCTTAGAGCTTCTGGCAGCTGTGTGTTTGGTGCGAGGAGGTCACGAAA
TCATCCTTGCTGCCTTTGACAATTTCAAAGAGGTATGCAAGGAGCTGCACCGCTTTGAGAAGCTGATGGA
GTATTTCCGGAATGAGGACAGCAATATTGACTTCATGGTGGCCTGCATGCAGTTCATCAACATCGTGGTG
CACTCGGTGGAGGACATGAACTTCCGGGTCCACCTGCAGTATGAGTTTACCAAGCTGGGGCTAGAGGAGT
TCCTGCAGAAGTCAAGGCACACAGAGAGCGAGAAGCTGCAGGTGCAGATTCAGGCATATCTGGACAACGT
GTTTGATGTCGGGGGTTTGTTGGAGGATGCTGAGACCAAGAATGTAGCCCTGGAGAAGGTGGAGGAGTTG
GAGGAGCATGTGTCCCATCTCACAGAGAAGCTTCTGGACCTAGAGAATGAAAACATGATGCGGGTGGCAG
AACTAGAGAAGCAGCTGCTACAGCGGGAGAAGGAACTAGAGAGCATCAAGGAGACATATGAGAACACAAG
CCACCAGGTGCACACCCTGCGGAGGCTCATTAAAGAGAAGGAGGAGGCCTTTCAGCGTCGATGTCATTTG
GAGCCAAATGTCCGGGGCCTGGAGTCTGTGGACAGTGAGGCCCTGGCCAGAGTAGGCCCTGCAGAGCTGA
GTGAGGGCATGCCACCCTCCGACCTGGACCTTCTGGCTCCAGCCCCACCCCCTGAGGAGGTCCTGCCTCT
TCCTCCACCACCAGCTCCGCCCTTGCCCCCTCCACCTCCCCCATTACCAGACAAGTGTCCCCCAGCCCCA
CCTCTCCCTGGTGCTGCACCCTCTGTGGTGTTGACAGTGGGCCTGTCAGCCATTCGAATTAAGAAACCTA
TCAAGACCAAGTTCCGGCTGCCTGTCTTCAACTGGACAGCACTGAAACCCAACCAGATCAGTGGCACTGT
CTTCAGCGAACTTGATGATGAGAAGATCTTGGAGGACCTGGATCTTGATAAGTTTGAAGAATTATTCAAG
ACAAAAGCGCAGGGCCCTGCCCTTGACCTCATCTGCTCCAAAAACAAGACAGCGCAAAAAGCTGCCAGCA
AGGTGACTCTGTTGGAAGCCAATCGTGCCAAGAACCTGGCCATCACCCTACGCAAGGCTGGCCGCTCGGC
TGAGGAGATCTGCAGGGCCATTCATACGTTTGACTTGCAGACACTACCTGTGGACTTCGTGGAGTGCCTG
ATGCGCTTCCTGCCCACAGAGGCTGAGGTAAAGCTGCTGCGGCAATATGAGCGGGAGCGGCAGCCCCTGG
AGGAGTTGGCAGCTGAGGACCGCTTCATGCTGCTCTTCAGCAAGGTGGAACGGTTGACCCAGCGAATGGC
TGGCATGGCCTTCCTGGGGAACTTCCAGGATAACCTGCAGATGCTCACACCGCAACTCAATGCCATCATT
GCGGCGTCCGCTTCCGTCAAGTCTTCACAGAAGCTGAAGCAGATGTTGGAGATCATACTTGCACTGGGGA
ACTACATGAACAGCAGCAAGCGGGGAGCTGTGTATGGCTTCAAGCTCCAGAGCCTGGATCTGCTGCTGGA
TACCAAGTCCACTGACCGGAAGATGACACTGCTTCATTTCATCGCCTTGACAGTGAAGGAGAAATACCCA
GACCTGGCTAACTTCTGGCATGAGCTGCACTTTGTTGAGAAGGCTGCAGCAGTGTCCCTGGAGAACGTGC
TGCTGGACGTGAAGGAGCTGGGCCGGGGCATGGAGCTGATTCGGCGTGAGTGCAGCATCCATGACAACAG
CGTCCTCCGGAACTTCCTCAGTACCAATGAAGGCAAACTAGACAAGCTCCAGCGGGACGCCAAGACGGCT
GAGGAGGCCTACAATGCAGTTGTGCGCTACTTTGGCGAGAGTCCCAAGACTACACCTCCTTCTGTATTCT
TCCCAGTATTTGTCCGATTCATTCGTTCTTACAAGGAAGCAGAACAAGAGAATGAAGCCCGCAAGAAGCA
GGAGGAGGTAATGCGGGAGAAGCAGCTGGCTCAGGAAGCCAAGAAACTGGATGCCAAGACCCCATCCCAG
CGGAACAAGTGGCAACAGCAGGAGTTAATAGCAGAGTTGAGGCGGCGCCAGGCCAAGGAACACCGGCCTG
TTTATGAGGGGAAGGATGGTACCATCGAGGACATCATCACAGGCCTCCACTGCCAGCCTATGGTTGTTCG
CCACCAAGCCAGGAGTGCTGCACCGCCCAGTGGTCCCCCTCGGGCTCCAGGCCCCCACTGA

Translation (976 aa):
MGNLESAEGVPGEPPSVPLLLPPGKMPMPEPCELEERFALVLSSMNLPPDKARLLRQYDNEKKWDLICDQ
ERFQVKNPPHTYIQKLQSFLDPSVTRKKFRRRVQESTKVLRELEISLRTNHIGWVREFLNDENKGLDVLV
DYLSFAQCSVMYSTLPGRRALKNSRLVSQKDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNK
NPRTKALVLELLAAVCLVRGGHEIILAAFDNFKEVCKELHRFEKLMEYFRNEDSNIDFMVACMQFINIVV
HSVEDMNFRVHLQYEFTKLGLEEFLQKSRHTESEKLQVQIQAYLDNVFDVGGLLEDAETKNVALEKVEEL
EEHVSHLTEKLLDLENENMMRVAELEKQLLQREKELESIKETYENTSHQVHTLRRLIKEKEEAFQRRCHL
EPNVRGLESVDSEALARVGPAELSEGMPPSDLDLLAPAPPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAP
PLPGAAPSVVLTVGLSAIRIKKPIKTKFRLPVFNWTALKPNQISGTVFSELDDEKILEDLDLDKFEELFK
TKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECL
MRFLPTEAEVKLLRQYERERQPLEELAAEDRFMLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAII
AASASVKSSQKLKQMLEIILALGNYMNSSKRGAVYGFKLQSLDLLLDTKSTDRKMTLLHFIALTVKEKYP
DLANFWHELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHDNSVLRNFLSTNEGKLDKLQRDAKTA
EEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVMREKQLAQEAKKLDAKTPSQ
RNKWQQQELIAELRRRQAKEHRPVYEGKDGTIEDIITGLHCQPMVVRHQARSAAPPSGPPRAPGPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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