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Report for CCDS41935.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41935.1 Public Homo sapiens 14 GMPR2 24 110 108 CCDS HistoryNCBI Gene:51292Re-query CCDS DB by CCDS ID:41935.1Re-query CCDS DB by GeneID:51292See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41935.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355299.8 ENSP00000347449.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355299.8Link to Ensembl Protein Viewer:ENSP00000347449.4Re-query CCDS DB by Nucleotide ID:ENST00000355299Re-query CCDS DB by Protein ID:ENSP00000347449
Original member Current member EBI ENST00000399440.7 ENSP00000382369.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399440.7Link to Ensembl Protein Viewer:ENSP00000382369.2Re-query CCDS DB by Nucleotide ID:ENST00000399440Re-query CCDS DB by Protein ID:ENSP00000382369
Original member Current member EBI ENST00000559836.5 ENSP00000453299.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559836.5Link to Ensembl Protein Viewer:ENSP00000453299.1Re-query CCDS DB by Nucleotide ID:ENST00000559836Re-query CCDS DB by Protein ID:ENSP00000453299
Original member Current member NCBI NM_001002000.3 NP_001002000.1 Accepted alive Link to Nucleotide Sequence:NM_001002000.3Link to Protein Sequence:NP_001002000.1Re-query CCDS DB by Nucleotide ID:NM_001002000Re-query CCDS DB by Protein ID:NP_001002000Link to BLAST:NP_001002000.1
Original member Current member NCBI NM_001002001.3 NP_001002001.1 Accepted alive Link to Nucleotide Sequence:NM_001002001.3Link to Protein Sequence:NP_001002001.1Re-query CCDS DB by Nucleotide ID:NM_001002001Re-query CCDS DB by Protein ID:NP_001002001Link to BLAST:NP_001002001.1
Original member Current member NCBI NM_001002002.3 NP_001002002.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002002.3Link to Protein Sequence:NP_001002002.1Re-query CCDS DB by Nucleotide ID:NM_001002002Re-query CCDS DB by Protein ID:NP_001002002Link to BLAST:NP_001002002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002000.1 348 Q9P2T1-1 348 100% 0 0
NP_001002001.1 348 Q9P2T1-1 348 100% 0 0
NP_001002002.1 348 Q9P2T1-1 348 100% 0 0

Chromosomal Locations for CCDS 41935.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24233254 24233340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24233479 24233598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24235737 24235820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24235967 24236140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237071 24237152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237245 24237351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237520 24237562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24238246 24238405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24238589 24238778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGCCTCATATTGACAACGATGTGAAACTGGACTTCAAGGATGTCCTTTTGAGGCCCAAACGCAGTACCC
TTAAGTCTCGAAGTGAGGTGGATCTCACAAGATCCTTTTCATTTCGGAACTCAAAGCAGACATACTCTGG
GGTTCCCATCATTGCTGCCAATATGGATACTGTGGGCACCTTTGAGATGGCCAAGGTTCTCTGTAAGTTC
TCTCTCTTCACTGCTGTCCATAAGCACTATAGCCTCGTTCAGTGGCAAGAGTTTGCTGGCCAGAATCCTG
ACTGTCTTGAGCATCTGGCTGCCAGCTCAGGCACAGGCTCTTCTGACTTTGAGCAGCTGGAACAGATCCT
GGAAGCTATTCCCCAGGTGAAGTATATATGCCTGGATGTGGCAAATGGCTACTCTGAACACTTTGTTGAA
TTTGTAAAAGATGTACGGAAGCGCTTCCCCCAGCACACCATCATGGCAGGGAATGTGGTAACAGGAGAGA
TGGTAGAAGAGCTCATCCTTTCTGGGGCTGACATCATCAAAGTGGGAATTGGGCCAGGCTCTGTGTGTAC
TACTCGGAAGAAAACTGGAGTGGGGTATCCACAGCTCAGCGCAGTGATGGAGTGTGCAGATGCTGCTCAT
GGCCTCAAAGGCCACATCATTTCAGATGGAGGTTGCAGCTGTCCTGGGGATGTGGCCAAGGCTTTTGGGG
CAGGAGCTGACTTCGTGATGCTGGGTGGCATGCTGGCTGGGCACAGTGAGTCAGGTGGTGAGCTCATCGA
GAGGGATGGCAAGAAGTACAAGCTCTTCTATGGAATGAGTTCTGAAATGGCCATGAAGAAGTATGCTGGG
GGCGTGGCTGAGTACAGAGCCTCAGAGGGAAAGACAGTGGAAGTTCCTTTTAAAGGAGATGTGGAACATA
CCATCCGAGACATCCTAGGAGGGATCCGCTCTACGTGTACCTATGTGGGAGCAGCTAAGCTCAAAGAGTT
GAGCAGGAGAACTACCTTCATCCGAGTCACCCAGCAGGTGAATCCAATCTTCAGTGAGGCGTGCTAG

Translation (348 aa):
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKF
SLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVE
FVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAH
GLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAG
GVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVTQQVNPIFSEAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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