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Report for CCDS42039.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42039.1 Public Homo sapiens 15 CCPG1 24 110 108 CCDS HistoryNCBI Gene:9236Re-query CCDS DB by CCDS ID:42039.1Re-query CCDS DB by GeneID:9236See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42039.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310958.10 ENSP00000311656.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310958.10Link to Ensembl Protein Viewer:ENSP00000311656.6Re-query CCDS DB by Nucleotide ID:ENST00000310958Re-query CCDS DB by Protein ID:ENSP00000311656
Original member Current member EBI ENST00000569205.5 ENSP00000454456.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000569205.5Link to Ensembl Protein Viewer:ENSP00000454456.1Re-query CCDS DB by Nucleotide ID:ENST00000569205Re-query CCDS DB by Protein ID:ENSP00000454456
Original member Current member NCBI NM_004748.6 NP_004739.3 Accepted alive Link to Nucleotide Sequence:NM_004748.6Link to Protein Sequence:NP_004739.3Re-query CCDS DB by Nucleotide ID:NM_004748Re-query CCDS DB by Protein ID:NP_004739Link to BLAST:NP_004739.3
Original member Current member NCBI NM_020739.5 NP_065790.2 Accepted alive Link to Nucleotide Sequence:NM_020739.5Link to Protein Sequence:NP_065790.2Re-query CCDS DB by Nucleotide ID:NM_020739Re-query CCDS DB by Protein ID:NP_065790Link to BLAST:NP_065790.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004739.3 757 Q9ULG6-1 757 100% 0 0
NP_065790.2 757 Q9ULG6-1 757 100% 0 0

Chromosomal Locations for CCDS 42039.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 55359499 55360944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55365188 55365309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55371793 55372044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55376949 55377150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55378300 55378376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55385600 55385714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55389365 55389424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGTCTGAAAATTCCAGTGACAGTGATTCATCTTGTGGTTGGACTGTCATCAGTCATGAGGGGTCAGATA
TAGAAATGTTGAATTCTGTGACCCCCACTGACAGCTGTGAGCCCGCCCCAGAATGTTCATCTTTAGAGCA
AGAGGAGCTTCAAGCATTGCAGATAGAGCAAGGAGAAAGCAGCCAAAATGGCACAGTGCTTATGGAAGAA
ACTGCTTATCCAGCTTTGGAGGAAACCAGCTCAACAATTGAGGCAGAGGAACAAAAGATACCCGAAGACA
GTATCTATATTGGAACTGCCAGTGATGATTCTGATATTGTTACCCTTGAGCCACCTAAGTTAGAAGAAAT
TGGAAATCAAGAAGTTGTCATTGTTGAAGAAGCACAGAGTTCAGAAGACTTTAACATGGGCTCTTCCTCT
AGCAGCCAGTATACTTTCTGTCAGCCAGAAACTGTATTTTCATCTCAGCCTAGTGACGATGAATCAAGTA
GTGATGAAACCAGTAATCAGCCCAGTCCTGCCTTTAGACGACGCCGTGCTAGGAAGAAGACCGTTTCTGC
TTCAGAATCTGAAGACCGGCTAGTTGCTGAACAAGAAACTGAACCTTCTAAGGAGTTGAGTAAACGTCAG
TTCAGTAGTGGTCTCAATAAGTGTGTTATACTTGCTTTGGTGATTGCAATCAGCATGGGATTTGGCCATT
TCTATGGCACAATTCAGATTCAGAAGCGTCAACAGTTAGTCAGAAAGATACATGAAGATGAATTGAATGA
TATGAAGGATTATCTTTCCCAGTGTCAACAGGAACAAGAATCTTTTATAGATTATAAGTCATTGAAAGAA
AATCTTGCAAGGTGTTGGACACTTACTGAAGCAGAGAAGATGTCCTTTGAAACTCAGAAAACGAACCTTG
CTACAGAAAATCAGTATTTAAGAGTATCCTTGGAGAAGGAAGAAAAAGCCTTATCCTCATTACAGGAAGA
GTTAAACAAACTAAGAGAACAGATTAGAATATTGGAAGATAAAGGGACAAGTACTGAATTAGTTAAAGAA
AATCAGAAACTTAAGCAGCATTTGGAAGAGGAAAAGCAGAAAAAACACAGCTTTCTTAGTCAAAGGGAGA
CTCTGTTGACAGAAGCAAAGATGCTAAAGAGAGAACTGGAGAGAGAACGACTAGTAACTACGGCTTTAAG
GGGGGAACTCCAGCAGTTAAGTGGTAGTCAGTTACATGGCAAGTCAGATTCTCCCAATGTATATACTGAA
AAAAAGGAAATAGCAATCTTACGGGAAAGACTCACTGAGCTGGAACGGAAGCTAACCTTCGAACAGCAGC
GTTCTGATTTGTGGGAAAGATTGTATGTTGAGGCAAAAGATCAAAATGGAAAACAAGGAACAGATGGAAA
AAAGAAAGGGGGCAGAGGAAGCCACAGGGCTAAAAATAAGTCAAAGGAAACATTTTTGGGTTCAGTTAAG
GAAACATTTGATGCCATGAAGAATTCTACCAAGGAGTTTGTAAGGCATCATAAAGAGAAAATTAAGCAGG
CTAAAGAAGCTGTGAAGGAAAATCTGAAAAAATTCTCAGATTCAGTTAAATCCACTTTCAGACACTTTAA
AGATACCACCAAGAATATCTTTGATGAAAAGGGTAATAAAAGATTTGGTGCTACAAAAGAAGCAGCTGAA
AAACCAAGAACAGTTTTTAGTGACTATTTACATCCACAGTATAAGGCACCTACAGAAAACCATCATAATA
GAGGCCCTACTATGCAAAATGATGGAAGGAAAGAAAAGCCAGTTCACTTTAAAGAATTCAGAAAAAATAC
AAATTCAAAGAAATGCAGTCCTGGGCATGATTGTAGAGAAAATTCTCATTCTTTCAGAAAGGCTTGTTCT
GGTGTATTTGATTGTGCTCAACAAGAGTCCATGAGCCTTTTTAACACAGTGGTGAATCCTATAAGGATGG
ATGAATTTAGACAGATAATTCAAAGGTACATGTTAAAAGAACTGGATACTTTTTGTCACTGGAACGAACT
TGATCAGTTCATCAATAAGTTTTTCCTAAACGGTGTCTTTATACATGATCAGAAGCTCTTCACTGACTTT
GTTAATGATGTTAAAGATTATCTTAGAAACATGAAGGAATATGAAGTAGATAATGATGGAGTATTTGAGA
AGTTGGATGAATATATATATAGACACTTCTTTGGTCACACTTTTTCCCCTCCATATGGACCCAGGTCGGT
TTACATAAAACCGTGTCATTACAGTAGTTTGTAA

Translation (757 aa):
MSENSSDSDSSCGWTVISHEGSDIEMLNSVTPTDSCEPAPECSSLEQEELQALQIEQGESSQNGTVLMEE
TAYPALEETSSTIEAEEQKIPEDSIYIGTASDDSDIVTLEPPKLEEIGNQEVVIVEEAQSSEDFNMGSSS
SSQYTFCQPETVFSSQPSDDESSSDETSNQPSPAFRRRRARKKTVSASESEDRLVAEQETEPSKELSKRQ
FSSGLNKCVILALVIAISMGFGHFYGTIQIQKRQQLVRKIHEDELNDMKDYLSQCQQEQESFIDYKSLKE
NLARCWTLTEAEKMSFETQKTNLATENQYLRVSLEKEEKALSSLQEELNKLREQIRILEDKGTSTELVKE
NQKLKQHLEEEKQKKHSFLSQRETLLTEAKMLKRELERERLVTTALRGELQQLSGSQLHGKSDSPNVYTE
KKEIAILRERLTELERKLTFEQQRSDLWERLYVEAKDQNGKQGTDGKKKGGRGSHRAKNKSKETFLGSVK
ETFDAMKNSTKEFVRHHKEKIKQAKEAVKENLKKFSDSVKSTFRHFKDTTKNIFDEKGNKRFGATKEAAE
KPRTVFSDYLHPQYKAPTENHHNRGPTMQNDGRKEKPVHFKEFRKNTNSKKCSPGHDCRENSHSFRKACS
GVFDCAQQESMSLFNTVVNPIRMDEFRQIIQRYMLKELDTFCHWNELDQFINKFFLNGVFIHDQKLFTDF
VNDVKDYLRNMKEYEVDNDGVFEKLDEYIYRHFFGHTFSPPYGPRSVYIKPCHYSSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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