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Report for CCDS42704.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42704.1 Public Homo sapiens 2 C2orf68 24 110 108 CCDS HistoryNCBI Gene:388969Re-query CCDS DB by CCDS ID:42704.1Re-query CCDS DB by GeneID:388969See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42704.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306336.6 ENSP00000304410.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306336.6Link to Ensembl Protein Viewer:ENSP00000304410.5Re-query CCDS DB by Nucleotide ID:ENST00000306336Re-query CCDS DB by Protein ID:ENSP00000304410
Original member Current member NCBI NM_001013649.4 NP_001013671.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013649.4Link to Protein Sequence:NP_001013671.2Re-query CCDS DB by Nucleotide ID:NM_001013649Re-query CCDS DB by Protein ID:NP_001013671Link to BLAST:NP_001013671.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013671.2 166 Q2NKX9-1 166 100% 0 0

Chromosomal Locations for CCDS 42704.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85608945 85609067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85609435 85609586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85611668 85611786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85611878 85611984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGAGGCGGGGCCGCATCCCCGGCCGGGGCACTGCTGCAAGCCTGGGGGGCGGCTGGACATGAACCACG
GCTTCGTGCACCATATCCGACGGAACCAGATCGCTCGGGACGACTATGACAAGAAGGTGAAGCAGGCGGC
CAAGGAGAAGGTGAGGAGGCGGCACACGCCCGCGCCGACGCGGCCCCGCAAGCCAGACCTGCAGGTGTAC
CTGCCGCGACACCGAGATGTCTCTGCCCACCCACGCAACCCAGACTATGAAGAGTCCGGTGAAAGCAGCA
GTAGTGGAGGCTCTGAGCTGGAGCCTTCTGGCCATCAGCTCTTCTGCTTAGAATACGAGGCAGACAGTGG
AGAGGTCACATCAGTTATCGTCTATCAGGGTGATGACCCAGGAAAGGTGAGTGAGAAGGTGTCGGCACAC
ACGCCTCTGGATCCACCCATGCGAGAAGCCCTCAAGTTGCGTATCCAGGAGGAGATTGCAAAGCGCCAGA
GCCAACACTGA

Translation (166 aa):
MEAGPHPRPGHCCKPGGRLDMNHGFVHHIRRNQIARDDYDKKVKQAAKEKVRRRHTPAPTRPRKPDLQVY
LPRHRDVSAHPRNPDYEESGESSSSGGSELEPSGHQLFCLEYEADSGEVTSVIVYQGDDPGKVSEKVSAH
TPLDPPMREALKLRIQEEIAKRQSQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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