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Report for CCDS42862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42862.1 Public Homo sapiens 20 DUSP15 24 110 108 CCDS HistoryNCBI Gene:128853Re-query CCDS DB by CCDS ID:42862.1Re-query CCDS DB by GeneID:128853See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398083.5 ENSP00000381157.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398083.5Link to Ensembl Protein Viewer:ENSP00000381157.1Re-query CCDS DB by Nucleotide ID:ENST00000398083Re-query CCDS DB by Protein ID:ENSP00000381157
Original member Current member EBI ENST00000398084.6 ENSP00000381158.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398084.6Link to Ensembl Protein Viewer:ENSP00000381158.2Re-query CCDS DB by Nucleotide ID:ENST00000398084Re-query CCDS DB by Protein ID:ENSP00000381158
Original member Current member EBI ENST00000486996.5 ENSP00000419818.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000486996.5Link to Ensembl Protein Viewer:ENSP00000419818.1Re-query CCDS DB by Nucleotide ID:ENST00000486996Re-query CCDS DB by Protein ID:ENSP00000419818
Original member Current member NCBI NM_001012644.3 NP_001012662.1 Accepted alive Link to Nucleotide Sequence:NM_001012644.3Link to Protein Sequence:NP_001012662.1Re-query CCDS DB by Nucleotide ID:NM_001012644Re-query CCDS DB by Protein ID:NP_001012662Link to BLAST:NP_001012662.1
Original member Current member NCBI NM_177991.3 NP_817130.1 Accepted alive Link to Nucleotide Sequence:NM_177991.3Link to Protein Sequence:NP_817130.1Re-query CCDS DB by Nucleotide ID:NM_177991Re-query CCDS DB by Protein ID:NP_817130Link to BLAST:NP_817130.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012662.1 132 Q9H1R2-4 132 100% 0 0
NP_817130.1 132 Q9H1R2-4 132 100% 0 0

Chromosomal Locations for CCDS 42862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 31861403 31861675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 31862571 31862696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (399 nt):
ATGACTGTGACGGGGCTAGGCTGGCGGGACGTGCTTGAAGCCATCAAGGCCACCAGGCCCATCGCCAACC
CCAACCCAGGCTTTAGGCAGCAGCTTGAAGAGTTTGGCTGGGCCAGTTCCCAGAAGCTTCGCCGGCAGCT
GGAGGAGCGCTTCGGCGAGAGCCCCTTCCGCGACGAGGAGGAGTTGCGCGCGCTGCTGCCGCTGTGCAAG
CGCTGCCGGCAGGGCTCCGCGACCTCGGCCTCCTCCGCCGGGCCGCACTCAGCAGCCTCCGAGGGAACCG
TGCAGCGCCTGGTGCCGCGCACGCCCCGGGAAGCCCACCGGCCGCTGCCGCTGCTGGCGCGCGTCAAGCA
GACTTTCTCTTGCCTCCCCCGGTGTCTGTCCCGCAAGGGCGGCAAGTGA

Translation (132 aa):
MTVTGLGWRDVLEAIKATRPIANPNPGFRQQLEEFGWASSQKLRRQLEERFGESPFRDEEELRALLPLCK
RCRQGSATSASSAGPHSAASEGTVQRLVPRTPREAHRPLPLLARVKQTFSCLPRCLSRKGGK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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