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Report for CCDS43391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43391.1 Public Homo sapiens 5 MRPL22 24 110 108 CCDS HistoryNCBI Gene:29093Re-query CCDS DB by CCDS ID:43391.1Re-query CCDS DB by GeneID:29093See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265229.12 ENSP00000265229.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000265229.12Link to Ensembl Protein Viewer:ENSP00000265229.8Re-query CCDS DB by Nucleotide ID:ENST00000265229Re-query CCDS DB by Protein ID:ENSP00000265229
Original member Current member NCBI NM_001014990.3 NP_001014990.1 Accepted alive Link to Nucleotide Sequence:NM_001014990.3Link to Protein Sequence:NP_001014990.1Re-query CCDS DB by Nucleotide ID:NM_001014990Re-query CCDS DB by Protein ID:NP_001014990Link to BLAST:NP_001014990.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014990.1 126 Q9NWU5-3 126 100% 0 0

Chromosomal Locations for CCDS 43391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 154956416 154956436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154957135 154957212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154959980 154960049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 154966686 154966897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (381 nt):
ATGTGGTATTTGGCAAAATTGATACGAGGAATGTCTATTGACCAGGCTTTGGCTCAGTTGGAATTCAATG
ACAAAAAAGGGGCCAAAATAATTAAAGAGGTTCTCTTAGAAGCACAAGATATGGCAGTGAGAGACCATAA
CGTGGAATTCAGGTCCAATTTATATATAGCTGAGTCCACCTCAGGACGAGGCCAGTGCCTGAAACGCATC
CGCTACCATGGCAGAGGTCGCTTTGGGATCATGGAGAAGGTTTATTGCCATTATTTTGTGAAGTTGGTGG
AAGGGCCCCCACCTCCACCTGAGCCACCAAAGACGGCAGTTGCCCATGCCAAAGAGTATATTCAGCAGCT
TCGCAGCCGGACCATCGTTCACACTCTATGA

Translation (126 aa):
MWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAESTSGRGQCLKRI
RYHGRGRFGIMEKVYCHYFVKLVEGPPPPPEPPKTAVAHAKEYIQQLRSRTIVHTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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