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Report for CCDS43394.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43394.1 Public Homo sapiens 5 ATP10B 24 110 108 CCDS HistoryNCBI Gene:23120Re-query CCDS DB by CCDS ID:43394.1Re-query CCDS DB by GeneID:23120See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43394.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327245.10 ENSP00000313600.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327245.10Link to Ensembl Protein Viewer:ENSP00000313600.5Re-query CCDS DB by Nucleotide ID:ENST00000327245Re-query CCDS DB by Protein ID:ENSP00000313600
Original member Current member NCBI NM_001366652.1 NP_001353581.1 Accepted alive Link to Nucleotide Sequence:NM_001366652.1Link to Protein Sequence:NP_001353581.1Re-query CCDS DB by Nucleotide ID:NM_001366652Re-query CCDS DB by Protein ID:NP_001353581Link to BLAST:NP_001353581.1
Original member Current member NCBI NM_001366655.1 NP_001353584.1 Accepted alive Link to Nucleotide Sequence:NM_001366655.1Link to Protein Sequence:NP_001353584.1Re-query CCDS DB by Nucleotide ID:NM_001366655Re-query CCDS DB by Protein ID:NP_001353584Link to BLAST:NP_001353584.1
Original member Current member NCBI NM_025153.3 NP_079429.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025153.3Link to Protein Sequence:NP_079429.2Re-query CCDS DB by Nucleotide ID:NM_025153Re-query CCDS DB by Protein ID:NP_079429Link to BLAST:NP_079429.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353581.1 1461 O94823-1 1461 100% 0 0
NP_001353584.1 1461 O94823-1 1461 100% 0 0
NP_079429.2 1461 O94823-1 1461 100% 0 0

Chromosomal Locations for CCDS 43394.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 160565453 160565900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160569496 160569683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160589592 160589696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160591059 160591139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160598770 160598970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160602577 160602702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160603965 160604041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160606765 160607086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160612741 160612925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160615838 160615964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160617864 160617973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160620347 160620950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160622394 160622585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160632129 160632367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160634354 160634606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160636182 160636309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160640461 160640592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160644138 160644244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160649171 160649256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160670463 160670667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160686079 160686273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160687800 160688074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4386 nt):
ATGGCCCTCTCAGTGGACTCATCGTGGCATCGGTGGCAGTGGAGAGTCAGAGATGGCTTCCCCCATTGTC
CATCGGAAACCACACCGCTGCTCTCTCCAGAGAAAGGGAGACAGAGCTACAACTTGACACAGCAGCGGGT
CGTGTTCCCCAACAACAGCATATTCCATCAAGATTGGGAAGAGGTCTCCAGGAGATACCCTGGCAACAGA
ACCTGCACAACCAAATACACCCTCTTCACCTTCCTGCCCCGGAATCTCTTTGAGCAATTTCATAGATGGG
CTAACCTCTATTTCCTGTTCCTGGTGATTTTGAACTGGATGCCCTCCATGGAAGTCTTCCACAGAGAAAT
CACCATGTTACCATTGGCCATTGTCCTGTTCGTCATCATGATCAAGGATGGCATGGAGGACTTCAAGAGA
CACCGCTTTGATAAAGCAATAAACTGCTCCAACATTCGAATTTATGAAAGAAAAGAGCAGACCTATGTGC
AGAAGTGCTGGAAGGATGTGCGCGTGGGAGACTTCATCCAAATGAAATGCAATGAGATTGTCCCAGCAGA
CATACTCCTCCTTTTTTCCTCTGACCCCAATGGGATATGCCATCTGGAAACTGCCAGCTTGGATGGAGAG
ACAAACCTCAAGCAAAGATGTGTCGTGAAGGGCTTCTCACAGCAGGAGGTACAGTTCGAACCAGAGCTTT
TCCACAATACCATCGTGTGTGAGAAACCCAACAACCACCTCAACAAATTTAAGGGTTATATGGAGCATCC
TGACCAGACCAGGACTGGCTTTGGCTGTGAGAGTCTTCTGCTTCGAGGCTGCACCATCAGAAACACCGAG
ATGGCTGTTGGCATTGTCATCTATGCAGGCCATGAGACGAAAGCCATGCTGAACAACAGTGGCCCCCGGT
ACAAACGCAGCAAGATTGAGCGGCGCATGAATATAGACATCTTCTTCTGCATTGGGATCCTCATCCTCAT
GTGCCTTATTGGAGCTGTAGGTCACAGCATCTGGAATGGGACCTTTGAAGAACACCCTCCCTTCGATGTG
CCAGATGCCAATGGCAGCTTCCTTCCCAGTGCCCTTGGGGGCTTCTACATGTTCCTCACAATGATCATCC
TGCTCCAGGTGCTGATCCCCATCTCTTTGTATGTCTCCATTGAGCTGGTGAAGCTCGGGCAAGTGTTCTT
CTTGAGCAATGACCTTGACCTGTATGATGAAGAGACCGATTTATCCATTCAATGTCGAGCCCTCAACATC
GCAGAGGACTTGGGCCAGATCCAGTACATCTTCTCCGATAAGACGGGGACCCTGACAGAGAACAAGATGG
TGTTCCGACGTTGCACCATCATGGGCAGCGAGTATTCTCACCAAGAAAATGCTAAGCGACTGGAGACCCC
AAAGGAGCTGGACTCAGATGGTGAAGAGTGGACCCAATACCAATGCCTGTCCTTCTCGGCTAGATGGGCC
CAGGATCCAGCAACTATGAGAAGCCAAAAAGGTGCTCAGCCTCTGAGGAGGAGCCAGAGTGCCCGGGTGC
CCATCCAGGGCCACTACCGGCAAAGGTCTATGGGGCACCGTGAAAGCTCACAGCCTCCTGTGGCCTTCAG
CAGCTCCATAGAAAAAGATGTAACTCCAGATAAAAACCTACTGACCAAGGTTCGAGATGCTGCCCTGTGG
TTGGAGACCTTGTCAGACAGCAGACCTGCCAAGGCTTCCCTCTCCACCACCTCCTCCATTGCTGATTTCT
TCCTTGCCTTAACCATCTGCAACTCTGTCATGGTGTCCACAACCACCGAGCCCAGGCAGAGGGTCACCAT
CAAACCCTCAAGCAAGGCTCTGGGGACGTCCCTGGAGAAGATTCAGCAGCTCTTCCAGAAGTTGAAGCTA
TTGAGCCTCAGCCAGTCATTCTCATCCACTGCACCCTCTGACACAGACCTCGGGGAGAGCTTAGGGGCCA
ACGTGGCCACCACAGACTCGGATGAGAGAGATGATGCATCTGTGTGCAGTGGAGGTGACTCCACTGATGA
CGGTGGCTACAGGAGCAGCATGTGGGACCAGGGCGACATCCTGGAGTCTGGGTCAGGCACTTCCTTGGAG
GAGGCATTGGAGGCCCCAGCCACAGACCTGGCCAGGCCTGAGTTCTGTTACGAGGCTGAGAGCCCTGATG
AGGCCGCCCTGGTGCACGCTGCCCATGCCTACAGCTTCACACTAGTGTCCCGGACACCTGAGCAGGTGAC
TGTGCGCCTGCCCCAGGGCACCTGCCTCACCTTCAGCCTCCTCTGCACCCTGGGCTTTGACTCTGTCAGG
AAGAGAATGTCTGTGGTTGTGAGGCACCCACTGACTGGCGAGATTGTTGTCTACACCAAGGGTGCTGACT
CGGTCATCATGGACCTGCTGGAAGACCCAGCCTGCGTACCTGACATTAATATGGAAAAGAAGCTGAGAAA
AATCCGAGCCCGGACCCAAAAGCATCTAGACTTGTATGCAAGAGATGGCCTGCGCACACTATGCATTGCC
AAGAAGGTTGTAAGCGAAGAGGACTTCCGGAGATGGGCCAGTTTCCGGCGTGAGGCTGAGGCATCCCTCG
ACAACCGAGATGAGCTTCTCATGGAAACTGCACAGCATCTGGAGAATCAACTCACCTTACTTGGAGCCAC
TGGGATCGAAGACCGGCTGCAGGAAGGAGTTCCAGATACGATTGCCACTCTGCGGGAGGCTGGGATCCAG
CTCTGGGTCCTGACTGGAGATAAGCAGGAGACAGCGGTCAACATTGCCCATTCCTGCAGACTGTTAAATC
AGACCGACACTGTTTATACCATCAATACAGAGAATCAGGAGACCTGTGAATCCATCCTCAATTGTGCATT
GGAAGAGCTAAAGCAATTTCGTGAACTACAGAAGCCAGACCGCAAGCTCTTTGGATTCCGCTTACCTTCC
AAGACACCATCCATCACCTCAGAAGCTGTGGTTCCAGAAGCTGGATTGGTCATCGATGGGAAGACATTGA
ATGCCATCTTCCAGGGAAAGCTAGAGAAGAAGTTTCTGGAATTGACCCAGTATTGTCGGTCCGTCCTGTG
CTGCCGCTCCACGCCACTCCAGAAGAGTATGATAGTCAAGCTGGTGCGAGACAAGTTGCGCGTCATGACC
CTTTCCATAGGTGATGGAGCAAATGATGTAAGCATGATTCAAGCTGCTGATATTGGAATTGGAATATCTG
GACAGGAAGGCATGCAGGCTGTCATGTCCAGCGACTTTGCCATCACCCGCTTTAAGCATCTCAAGAAGTT
GCTGCTCGTGCATGGCCACTGGTGTTACTCGCGCCTGGCCAGGATGGTGGTGTACTACCTCTACAAGAAC
GTGTGCTACGTCAACCTGCTCTTCTGGTATCAGTTCTTCTGTGGTTTCTCCAGCTCCACCATGATTGATT
ACTGGCAGATGATATTCTTCAATCTCTTCTTTACCTCCTTGCCTCCTCTTGTCTTTGGAGTCCTTGACAA
AGACATCTCTGCAGAAACACTCCTGGCATTGCCTGAGCTATACAAGAGTGGCCAGAACTCTGAGTGCTAT
AACCTGTCGACTTTCTGGATTTCTATGGTGGATGCATTCTACCAGAGCCTCATCTGTTTCTTTATCCCTT
ACCTGGCCTATAAGGGCTCTGATATAGATGTCTTTACCTTTGGGACACCAATCAACACCATCTCCCTCAC
CACAATCCTTTTGCACCAGGCAATGGAAATGAAGACATGGACCATTTTCCACGGAGTCGTGCTCCTCGGC
AGCTTCCTGATGTACTTTCTGGTATCCCTCCTGTACAATGCCACCTGCGTCATCTGCAACAGCCCCACCA
ATCCCTATTGGGTGATGGAAGGCCAGCTCTCAAACCCCACTTTCTACCTCGTCTGCTTTCTCACACCAGT
TGTTGCTCTTCTCCCAAGATACTTTTTCCTGTCTCTGCAAGGAACTTGTGGGAAGTCTCTAATCTCAAAA
GCTCAGAAAATTGACAAACTCCCCCCAGACAAAAGAAACCTGGAAATCCAGAGTTGGAGAAGCAGACAGA
GGCCTGCCCCTGTCCCCGAAGTGGCTCGACCAACTCACCACCCAGTGTCATCTATCACAGGACAGGACTT
CAGTGCCAGCACCCCAAAGAGCTCTAACCCTCCCAAGAGGAAGCATGTGGAAGAGTCAGTACTCCACGAA
CAGAGATGTGGCACGGAGTGCATGAGGGATGACTCATGCTCAGGGGACTCCTCAGCTCAACTCTCATCCG
GGGAGCACCTGCTGGGACCTAACAGGATAATGGCCTACTCAAGAGGACAGACTGATATGTGCCGGTGCTC
AAAGAGGAGCAGCCATCGCCGATCCCAGAGTTCACTGACCATATGA

Translation (1461 aa):
MALSVDSSWHRWQWRVRDGFPHCPSETTPLLSPEKGRQSYNLTQQRVVFPNNSIFHQDWEEVSRRYPGNR
TCTTKYTLFTFLPRNLFEQFHRWANLYFLFLVILNWMPSMEVFHREITMLPLAIVLFVIMIKDGMEDFKR
HRFDKAINCSNIRIYERKEQTYVQKCWKDVRVGDFIQMKCNEIVPADILLLFSSDPNGICHLETASLDGE
TNLKQRCVVKGFSQQEVQFEPELFHNTIVCEKPNNHLNKFKGYMEHPDQTRTGFGCESLLLRGCTIRNTE
MAVGIVIYAGHETKAMLNNSGPRYKRSKIERRMNIDIFFCIGILILMCLIGAVGHSIWNGTFEEHPPFDV
PDANGSFLPSALGGFYMFLTMIILLQVLIPISLYVSIELVKLGQVFFLSNDLDLYDEETDLSIQCRALNI
AEDLGQIQYIFSDKTGTLTENKMVFRRCTIMGSEYSHQENAKRLETPKELDSDGEEWTQYQCLSFSARWA
QDPATMRSQKGAQPLRRSQSARVPIQGHYRQRSMGHRESSQPPVAFSSSIEKDVTPDKNLLTKVRDAALW
LETLSDSRPAKASLSTTSSIADFFLALTICNSVMVSTTTEPRQRVTIKPSSKALGTSLEKIQQLFQKLKL
LSLSQSFSSTAPSDTDLGESLGANVATTDSDERDDASVCSGGDSTDDGGYRSSMWDQGDILESGSGTSLE
EALEAPATDLARPEFCYEAESPDEAALVHAAHAYSFTLVSRTPEQVTVRLPQGTCLTFSLLCTLGFDSVR
KRMSVVVRHPLTGEIVVYTKGADSVIMDLLEDPACVPDINMEKKLRKIRARTQKHLDLYARDGLRTLCIA
KKVVSEEDFRRWASFRREAEASLDNRDELLMETAQHLENQLTLLGATGIEDRLQEGVPDTIATLREAGIQ
LWVLTGDKQETAVNIAHSCRLLNQTDTVYTINTENQETCESILNCALEELKQFRELQKPDRKLFGFRLPS
KTPSITSEAVVPEAGLVIDGKTLNAIFQGKLEKKFLELTQYCRSVLCCRSTPLQKSMIVKLVRDKLRVMT
LSIGDGANDVSMIQAADIGIGISGQEGMQAVMSSDFAITRFKHLKKLLLVHGHWCYSRLARMVVYYLYKN
VCYVNLLFWYQFFCGFSSSTMIDYWQMIFFNLFFTSLPPLVFGVLDKDISAETLLALPELYKSGQNSECY
NLSTFWISMVDAFYQSLICFFIPYLAYKGSDIDVFTFGTPINTISLTTILLHQAMEMKTWTIFHGVVLLG
SFLMYFLVSLLYNATCVICNSPTNPYWVMEGQLSNPTFYLVCFLTPVVALLPRYFFLSLQGTCGKSLISK
AQKIDKLPPDKRNLEIQSWRSRQRPAPVPEVARPTHHPVSSITGQDFSASTPKSSNPPKRKHVEESVLHE
QRCGTECMRDDSCSGDSSAQLSSGEHLLGPNRIMAYSRGQTDMCRCSKRSSHRRSQSSLTI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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