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Report for CCDS43496.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43496.1 Public Homo sapiens 6 RWDD1 24 110 108 CCDS HistoryNCBI Gene:51389Re-query CCDS DB by CCDS ID:43496.1Re-query CCDS DB by GeneID:51389See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43496.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000487832.6 ENSP00000428778.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000487832.6Link to Ensembl Protein Viewer:ENSP00000428778.1Re-query CCDS DB by Nucleotide ID:ENST00000487832Re-query CCDS DB by Protein ID:ENSP00000428778
Original member Current member NCBI NM_001007464.3 NP_001007465.1 Accepted alive Link to Nucleotide Sequence:NM_001007464.3Link to Protein Sequence:NP_001007465.1Re-query CCDS DB by Nucleotide ID:NM_001007464Re-query CCDS DB by Protein ID:NP_001007465Link to BLAST:NP_001007465.1
Original member Current member NCBI NM_016104.4 NP_057188.2 Accepted alive Link to Nucleotide Sequence:NM_016104.4Link to Protein Sequence:NP_057188.2Re-query CCDS DB by Nucleotide ID:NM_016104Re-query CCDS DB by Protein ID:NP_057188Link to BLAST:NP_057188.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007465.1 147 Q9H446-2 147 100% 0 0
NP_057188.2 147 Q9H446-2 147 100% 0 0

Chromosomal Locations for CCDS 43496.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 116588860 116588985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116590272 116590404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116590888 116590950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 116592980 116593101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGTGATGATTTTTACTCTAGTGACAGCTGTGCAAGAAAAATTAAATGAAATAGTAGATCAGATAAAAA
CTAGAAGAGAAGAAGAAAAGAAACAAAAAGAAAAAGAAGCAGAAGAAGCTGAAAAGCAATTATTCCATGG
TACTCCAGTTACAATTGAGAATTTCTTAAATTGGAAAGCCAAGTTTGATGCAGAACTCTTGGAAATTAAA
AAGAAAAGGATGAAAGAAGAAGAACAAGCAGGAAAAAATAAATTAAGTGGGAAACAACTATTTGAAACAG
ATCATAATCTTGACACATCTGATATCCAGTTCTTGGAGGATGCTGGAAACAACGTGGAGGTAGATGAGTC
TTTGTTCCAAGAAATGGATGACTTGGAGCTGGAGGATGATGAAGATGATCCAGACTATAATCCTGCTGAC
CCAGAGAGTGACTCAGCTGACTAA

Translation (147 aa):
MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIK
KKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDDEDDPDYNPAD
PESDSAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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