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Report for CCDS43614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43614.1 Public Homo sapiens 7 GTPBP10 24 110 108 CCDS HistoryNCBI Gene:85865Re-query CCDS DB by CCDS ID:43614.1Re-query CCDS DB by GeneID:85865See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257659.12 ENSP00000257659.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000257659.12Link to Ensembl Protein Viewer:ENSP00000257659.8Re-query CCDS DB by Nucleotide ID:ENST00000257659Re-query CCDS DB by Protein ID:ENSP00000257659
Original member Current member NCBI NM_001042717.3 NP_001036182.1 Accepted alive Link to Nucleotide Sequence:NM_001042717.3Link to Protein Sequence:NP_001036182.1Re-query CCDS DB by Nucleotide ID:NM_001042717Re-query CCDS DB by Protein ID:NP_001036182Link to BLAST:NP_001036182.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036182.1 308 A4D1E9-2 308 100% 0 0

Chromosomal Locations for CCDS 43614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 90346742 90346774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90352816 90353009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90372155 90372228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90374302 90374354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90377507 90377614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90378134 90378211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90382956 90383079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 90384892 90385154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGTGCATTGCAGTTGCGTGTTGTTCAGAAAGTATGGAAATTTCATCGATAAGCTAAGACTCTTCACCA
GGGGAGGATCCGGTGGAATGGGTTATCCTCGTTTAGGTGGAGAAGGTGGAAAAGGTGGTGATGTCTGGGT
TGTAGCCCAGAACAGAATGACTTTAAAACAACTTAAAGACAGGTATCCTCGGAAACGGTTTGTGGCTGGA
GTAGGAGCAAACAGCAAATTCCCAAATGCTGGAAAATCCTCTTTGCTAAGTTGTGTTTCTCATGCAAAAC
CTGCAATTGCAGATTACGCATTTACAACATTAAAGCCTGAACTTGGAAAGATAATGTACAGTGATTTCAA
ACAGATATCAGTAGCTGATCTTCCGGGTTTAATAGAAGGAGCACATATGAACAAAGGAATGGGCCACAAA
TTCCTCAAGCATATAGAAAGAACTAGACAACTACTTTTTGTTGTTGATATTTCTGGATTTCAGCTTTCTT
CTCACACTCAATACAGGACAGCTTTTGAAACCATAATACTGCTTACAAAAGAGTTGGAATTGTACAAAGA
GGAACTTCAGACAAAACCTGCACTCTTGGCAGTTAATAAAATGGACTTGCCAGATGCCCAAGATAAGTTC
CATGAATTGATGAGCCAGCTCCAGAATCCTAAAGATTTTCTGCATTTATTTGAAAAAAACATGATTCCAG
AGAGGACTGTAGAGTTCCAACATATCATCCCCATATCTGCAGTTACTGGAGAAGGAATCGAAGAATTAAA
GAATTGTATAAGAAAGTCACTGGATGAACAGGCCAACCAGGAAAATGATGCACTTCATAAGAAACAGTTG
CTTAATTTGTGGATTTCTGATACAATGTCTTCTACTGAGCCACCATCAAAGCATGCTGTTACTACTTCCA
AAATGGATATAATTTAA

Translation (308 aa):
MVHCSCVLFRKYGNFIDKLRLFTRGGSGGMGYPRLGGEGGKGGDVWVVAQNRMTLKQLKDRYPRKRFVAG
VGANSKFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIMYSDFKQISVADLPGLIEGAHMNKGMGHK
FLKHIERTRQLLFVVDISGFQLSSHTQYRTAFETIILLTKELELYKEELQTKPALLAVNKMDLPDAQDKF
HELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPISAVTGEGIEELKNCIRKSLDEQANQENDALHKKQL
LNLWISDTMSSTEPPSKHAVTTSKMDII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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