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Report for CCDS43744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43744.1 Public Homo sapiens 8 CSPP1 24 110 108 CCDS HistoryNCBI Gene:79848Re-query CCDS DB by CCDS ID:43744.1Re-query CCDS DB by GeneID:79848See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43744.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000676317.1 ENSP00000502047.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676317.1Link to Ensembl Protein Viewer:ENSP00000502047.1Re-query CCDS DB by Nucleotide ID:ENST00000676317Re-query CCDS DB by Protein ID:ENSP00000502047
Original member Current member NCBI NM_024790.6 NP_079066.5 Accepted alive Link to Nucleotide Sequence:NM_024790.6Link to Protein Sequence:NP_079066.5Re-query CCDS DB by Nucleotide ID:NM_024790Re-query CCDS DB by Protein ID:NP_079066Link to BLAST:NP_079066.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079066.5 1221 Q1MSJ5-1 1221 100% 0 0

Chromosomal Locations for CCDS 43744.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 67064399 67064496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67074243 67074351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67076482 67076581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67086007 67086110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67093543 67093641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67095293 67095732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67103037 67103135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67105905 67105975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67111972 67112065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67113805 67113862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67115914 67116122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118248 67118369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118743 67118821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67131951 67132080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67137456 67137603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67149783 67149935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67154024 67154136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158447 67158596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158991 67159137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67161811 67161915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67163732 67163798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67164391 67164508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67172416 67172555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67175296 67175436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67177680 67177726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67179863 67179926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67190650 67190759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67193464 67193602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67195382 67195593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3666 nt):
ATGCTGTTCCCGCTCCAGGTGGCCGCTGTAACCTCTTCGGTCCGCGACGATCCTCTAGAGCACTGTGTGT
CTCCCCGGACGCGAGCCCGCTCCCCTGAAATCTGCAAAATGGCTGATAATTTGGATGAATTTATTGAAGA
GCAAAAAGCCAGATTGGCCGAAGACAAAGCAGAGTTGGAAAGTGATCCACCTTACATGGAAATGAAGGGA
AAGTTGTCAGCGAAGCTTTCTGAAAACAGTAAGATACTGATCTCTATGGCTAAGGAAAACATACCACCAA
ATAGTCAACAGACCAGGGGTTCCTTAGGAATTGATTATGGATTAAGTTTACCACTTGGAGAAGACTATGA
ACGGAAGAAACATAAATTAAAAGAAGAATTGCGGCAAGATTACAGACGTTATCTTACTCAGGAAAGGTTG
AAACTTGAACGTAACAAAGAATACAATCAGTTTCTCAGGGGTAAGGAAGAATCCAGTGAAAAGTTCAGGC
AGGTGGAAAAGAGTACTGAGCCCAAGAGTCAGAGAAATAAAAAACCTATTGGTCAAGTTAAGCCTGATCT
AACTTCACAAATACAGACATCTTGTGAAAATTCAGAGGGTCCTAGAAAAGATGTCTTAACTCCTTCAGAG
GCATATGAAGAACTTCTGAACCAAAGACGACTAGAGGAGGACAGATACCGACAACTAGATGATGAAATCG
AATTAAGGAATAGAAGAATTATTAAAAAAGCAAATGAAGAAGTGGGCATTTCCAACCTAAAACATCAAAG
GTTTGCAAGCAAGGCTGGCATTCCAGATAGAAGATTTCACAGATTTAATGAGGATCGTGTTTTTGATAGA
CGGTATCATAGACCAGACCAAGATCCTGAAGTAAGTGAAGAAATGGATGAGAGGTTTAGATATGAAAGTG
ATTTTGATAGAAGACTTTCGAGAGTGTATACAAATGACAGGATGCACAGGAACAAACGAGGGAATATGCC
TCCTATGGAACATGATGGGGATGTTATAGAACAGTCAAACATAAGAATTTCATCTGCTGAAAATAAAAGT
GCTCCAGACAATGAAACATCCAAATCTGCTAATCAAGATACCTGTAGTCCTTTTGCAGGGATGCTCTTTG
GAGGTGAAGATCGAGAACTTATTCAGAGAAGGAAAGAGAAATACAGACTAGAACTGTTGGAACAAATGGC
TGAGCAACAGAGGAACAAGAGACGAGAAAAAGATTTAGAACTCAGGGTTGCAGCGTCTGGAGCACAAGAC
CCTGAGAAATCGCCTGATAGACTAAAGCAGTTTAGTGTGGCACCAAGACACTTTGAAGAGATGATACCAC
CTGAAAGACCCAGAATAGCTTTCCAGACACCTCTCCCTCCTTTATCTGCCCCATCTGTCCCACCCATCCC
ATCAGTTCATCCTGTTCCTTCTCAAAATGAAGATTTGCGCAGTGGACTCAGCAGCGCCCTTGGTGAAATG
GTGTCTCCCAGGATTGCACCTCTGCCTCCACCTCCCCTACTACCACCTTTGGCTACTAACTATCGAACTC
CTTATGATGATGCATACTATTTTTATGGGTCCAGGAATACTTTCGATCCCAGTCTTGCTTATTATGGTTC
AGGAATGATGGGCGTACAGCCTGCAGCTTATGTTAGTGCTCCTGTCACCCACCAACTAGCACAACCTGTT
GTGAATACGGTTGGACAGAATGAACTGAAGATTACAAGTGATCAAGTGATAAATTCAGGATTGATTTTTG
AAGATAAACCGAAACCTTCCAAACAGTCACTTCAGTCTTACCAAGAGGCTTTGCAGCAGCAGATTCGGGA
AAGAGAAGAAAGAAGGAAGAAAGAACGTGAAGAAAAAGAAGAATATGAAGCTAAATTAGAAGCTGAAATG
AGAACATATAATCCCTGGGGAAAAGGTGGAGGTGGTGCTCCTCTCAGGGATGCAAAAGGAAATCTGATAA
CTGATTTGAATAGGATGCACAGACAAAATATAGATGCCTACCATAACCCAGATGCAAGAACATATGAAGA
TAAAAGGGCTGTTGTATCTCTAGACCCAAATTTAGCCACTTCAAATGCTGAGAACCTAGAAGATGCTGCA
AATAAAAGCTCAGGTCATATGCAAACACAGAGCTCTCCTTTTGCTCGGGGAAATGTATTTGGTGAGCCTC
CAACTGAACTTCAGATTAAACAGCAAGAATTATACAAGAATTTTCTTCGTTTCCAGATTGAGGAAAAGAA
ACAAAGAGAGGAAGCAGAGCGAGAGAGACTGAGAATTGCAGAAGAAAAAGAAGAAAGACGGCTTGCAGAA
CAGAGGGCACGAATTCAGCAGGAGTATGAAGAGGAACAGGAAAAGAAAAGAGAGAAAGAGGAGGAGCAAA
GGCTAAAAAATGAAGAGCATATTCGGTTAGCTGAAGAAAGACAAAAAGAAGCAGAAAGAAAGAAGAAAGA
AGAAGAAGAAAAATATAACCTGCAACTTCAGCACTACTGTGAAAGAGACAATTTGATTGGGGAAGAAACA
AAGCACATGAGACAGCCTTCTCCTATAGTTCCTGCTCTTCAGAACAAAATTGCAAGCAAACTCCAAAGAC
CTCCTTCAGTTGACAGCATCATACGTTCCTTTATTCATGAAAGTTCCATGTCCAGGGCACAGTCACCCCC
GGTACCTGCCAGGAAAAATCAGCTCCGTGCAGAAGAGGAGAAAAAAAATGTAATTATGGAATTATCAGAA
ATGAGAAAACAGCTTCGTAGTGAAGAGAGGCGTCTACAAGAGCGATTGCTACACATGGACAGTGATGATG
AAATTCCTATCAGGAAAAAGGAAAGGAATCCCATGGATATATTTGATATGGCTAGACATCGGTTGCAAGC
TCCTGTCAGAAGACAGTCCCCTAAGGGCTTAGACGCTGCCACTTTTCAGAATGTTCATGATTTTAATGAG
CTGAAAGATAGAGATTCAGAAACACGAGTTGATCTGAAATTTATGTACCTGGATCCTCCAAGAGATCATC
ACACCTTAGAGATTCAGCAGCAAGCCCTGCTAAGAGAGCAGCAGAAGAGGCTGAACAGAATAAAAATGCA
GGAAGGTGCCAAAGTTGACTTAGATGCCATCCCAAGTGCTAAAGTACGAGAGCAAAGAATGCCCAGAGAT
GACACTAGTGATTTCTTGAAAAACTCATTATTGGAATCTGATAGTGCTTTTATTGGGGCTTACGGTGAGA
CATATCCTGCCATTGAAGATGACGTCCTCCCTCCACCATCACAGTTGCCCTCTGCACGGGAGCGCAGGAG
GAACAAATGGAAAGGACTAGACATTGATAGCAGTCGTCCTAATGTAGCACCAGATGGTCTCTCTCTAAAA
TCTATATCCAGTGTAAATGTTGATGAGCTTAGAGTGAGAAATGAGGAACGAATGCGAAGACTGAATGAAT
TTCACAATAAACCTATTAATACAGATGATGAGAGTTCACTGGTTGACCCTGATGACATCATGAAACACAT
AGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCTGGCTCCGCCCTGGCACTTCAGAAACGCTGAAA
CGTTTCATGGCAGAGCAGCTGAACCAGGAGCAGCAGCAGATTCCTGGAAAACCAGGCACTTTCACTTGGC
AGGGCCTGTCGACTGCACATGGTTAA

Translation (1221 aa):
MLFPLQVAAVTSSVRDDPLEHCVSPRTRARSPEICKMADNLDEFIEEQKARLAEDKAELESDPPYMEMKG
KLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDYGLSLPLGEDYERKKHKLKEELRQDYRRYLTQERL
KLERNKEYNQFLRGKEESSEKFRQVEKSTEPKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDVLTPSE
AYEELLNQRRLEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIPDRRFHRFNEDRVFDR
RYHRPDQDPEVSEEMDERFRYESDFDRRLSRVYTNDRMHRNKRGNMPPMEHDGDVIEQSNIRISSAENKS
APDNETSKSANQDTCSPFAGMLFGGEDRELIQRRKEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQD
PEKSPDRLKQFSVAPRHFEEMIPPERPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSSALGEM
VSPRIAPLPPPPLLPPLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQLAQPV
VNTVGQNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEAKLEAEM
RTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSLDPNLATSNAENLEDAA
NKSSGHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIEEKKQREEAERERLRIAEEKEERRLAE
QRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKKKEEEEKYNLQLQHYCERDNLIGEET
KHMRQPSPIVPALQNKIASKLQRPPSVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSE
MRKQLRSEERRLQERLLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNVHDFNE
LKDRDSETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVREQRMPRD
DTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLDIDSSRPNVAPDGLSLK
SISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIMKHIGDDGSNSVATEPWLRPGTSETLK
RFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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