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Report for CCDS44045.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44045.1 Public Homo sapiens 1 PEX10 24 110 108 CCDS HistoryNCBI Gene:5192Re-query CCDS DB by CCDS ID:44045.1Re-query CCDS DB by GeneID:5192See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44045.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447513.7 ENSP00000407922.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447513.7Link to Ensembl Protein Viewer:ENSP00000407922.2Re-query CCDS DB by Nucleotide ID:ENST00000447513Re-query CCDS DB by Protein ID:ENSP00000407922
Original member Current member NCBI NM_002617.4 NP_002608.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002617.4Link to Protein Sequence:NP_002608.1Re-query CCDS DB by Nucleotide ID:NM_002617Re-query CCDS DB by Protein ID:NP_002608Link to BLAST:NP_002608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002608.1 326 O60683-1 326 100% 0 0

Chromosomal Locations for CCDS 44045.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 2405766 2405834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 2406484 2406619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 2406720 2406895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 2408452 2408858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 2410371 2410451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 2412391 2412502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGGCCCCGGCCGCCGCCAGCCCCCCGGAGGTGATCCGCGCGGCGCAGAAGGACGAGTACTACCGCGGTG
GGCTGCGGAGCGCGGCGGGCGGCGCCCTGCACAGCCTGGCGGGTGCGAGGAAGTGGCTGGAGTGGAGGAA
GGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCTACCAGACCCTGGGG
GAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCG
TGCTGGTGACACTGCATGCCGTCCTGCCCTACCTGCTGGACAAGGCCCTGCTCCCCCTGGAGCAGGAGCT
GCAGGCTGACCCCGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCCAGGTGGGCGTGGCTGCTCAGGG
GCGCGGCGCTGGATGCGTCACCACACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCTGCGGGCGG
TCTTCGTCCTCAGACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGCCTGGTTTTACATCCACGGTGT
CTTCTACCACCTGGCCAAGAGGCTCACGGGGATCACGTACCTCCGTGTCCGCAGCCTGCCCGGAGAGGAC
CTGAGGGCCCGTGTTAGCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCATGGGGC
TGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCA
CCGCAGGGCCTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGC
AGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCAGCA
AGGCGGAGTGTCCCCTCTGCCGGGAGAAGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACTACCGCTG
A

Translation (326 aa):
MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTTLAGYQTLG
EEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQELQADPDSGRPLQGSLGPGGRGCSG
ARRWMRHHTATLTEQQRRALLRAVFVLRQGLACLQRLHVAWFYIHGVFYHLAKRLTGITYLRVRSLPGED
LRARVSYRLLGVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLSHRRASLEERAVSRNPLCTLCLEER
RHPTATPCGHLFCWECITAWCSSKAECPLCREKFPPQKLIYLRHYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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