NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS44071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44071.1 Public Homo sapiens 1 MFAP2 24 110 108 CCDS HistoryNCBI Gene:4237Re-query CCDS DB by CCDS ID:44071.1Re-query CCDS DB by GeneID:4237See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375534.7 ENSP00000364684.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375534.7Link to Ensembl Protein Viewer:ENSP00000364684.3Re-query CCDS DB by Nucleotide ID:ENST00000375534Re-query CCDS DB by Protein ID:ENSP00000364684
Original member Current member NCBI NM_001135247.2 NP_001128719.1 Accepted alive Link to Nucleotide Sequence:NM_001135247.2Link to Protein Sequence:NP_001128719.1Re-query CCDS DB by Nucleotide ID:NM_001135247Re-query CCDS DB by Protein ID:NP_001128719Link to BLAST:NP_001128719.1
Original member Current member NCBI NM_001135248.2 NP_001128720.1 Accepted alive Link to Nucleotide Sequence:NM_001135248.2Link to Protein Sequence:NP_001128720.1Re-query CCDS DB by Nucleotide ID:NM_001135248Re-query CCDS DB by Protein ID:NP_001128720Link to BLAST:NP_001128720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128719.1 182 P55001-2 182 100% 0 0
NP_001128720.1 182 P55001-2 182 100% 0 0

Chromosomal Locations for CCDS 44071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 16974920 16975023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16975269 16975342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16975643 16975730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16976501 16976545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16976708 16976794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16976897 16976923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16977109 16977195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 16978237 16978273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGAGAGCTGCCTACCTCTTCCTGCTATTCCTGCCTGGCTTGCTGGCTCAGGGCCAGTATGACCTGGACC
CGCTGCCGCCGTTCCCTGACCACGTCCAGTACACCCACTATAGCGACCAGATCGACAACCCAGACTACTA
TGATTATCAAGAGGTGACTCCTCGGCCCTCCGAGGAACAGTTCCAGTTCCAGTCCCAGCAGCAAGTCCAA
CAGGAAGTCATCCCAGCCCCAACCCCAGAACCAGGAAATGCAGAGCTGGAGCCCACAGAGCCTGGGCCTC
TTGACTGCCGTGAGGAACAGTACCCGTGCACCCGCCTCTACTCCATACACAGGCCTTGCAAACAGTGTCT
CAACGAGGTCTGCTTCTACAGCCTCCGCCGTGTGTACGTCATTAACAAGGAGATCTGTGTTCGTACAGTG
TGTGCCCATGAGGAGCTCCTCCGAGCTGACCTCTGTCGGGACAAGTTCTCCAAATGTGGCGTGATGGCCA
GCAGCGGCCTGTGCCAATCCGTGGCGGCCTCCTGTGCCAGGAGCTGTGGGAGCTGCTAG

Translation (182 aa):
MRAAYLFLLFLPGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQ
QEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTV
CAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCGSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH