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Report for CCDS44448.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44448.1 Public Homo sapiens 10 TSPAN14 24 110 108 CCDS HistoryNCBI Gene:81619Re-query CCDS DB by CCDS ID:44448.1Re-query CCDS DB by GeneID:81619See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44448.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000481124.5 ENSP00000418195.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481124.5Link to Ensembl Protein Viewer:ENSP00000418195.1Re-query CCDS DB by Nucleotide ID:ENST00000481124Re-query CCDS DB by Protein ID:ENSP00000418195
Original member Current member NCBI NM_001128309.3 NP_001121781.1 Accepted alive Link to Nucleotide Sequence:NM_001128309.3Link to Protein Sequence:NP_001121781.1Re-query CCDS DB by Nucleotide ID:NM_001128309Re-query CCDS DB by Protein ID:NP_001121781Link to BLAST:NP_001121781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121781.1 147 Q8NG11-3 147 100% 0 0

Chromosomal Locations for CCDS 44448.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80489234 80489314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80512144 80512269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80514019 80514063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80516204 80516323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80517905 80517976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACA
TCATCTTCTGGAACCAGTGCTGTGGCGCATATGGCCCTGAAGACTGGGACCTCAACGTCTACTTCAATTG
CAGCGGTGCCAGCTACAGCCGAGAGAAGTGCGGGGTCCCCTTCTCCTGCTGCGTGCCAGATCCTGCGCAA
AAAGTTGTGAACACACAGTGTGGATATGATGTCAGGATTCAGCTGAAGAGCAAGTGGGATGAGTCCATCT
TCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTGGCTCCCGCGGAACATTTACATTGTGGCTGGCGTCTT
CATCGCCATCTCGCTGTTGCAGATATTTGGCATCTTCCTGGCAAGGACGCTGATCTCAGACATCGAGGCA
GTGAAGGCCGGCCATCACTTCTGA

Translation (147 aa):
MHYYRYSNAKVSCWYKYLLFSYNIIFWNQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQ
KVVNTQCGYDVRIQLKSKWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEA
VKAGHHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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