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Report for CCDS44480.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44480.1 Public Homo sapiens 10 FHIP2A 24 110 108 CCDS HistoryNCBI Gene:57700Re-query CCDS DB by CCDS ID:44480.1Re-query CCDS DB by GeneID:57700See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44480.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369250.7 ENSP00000358253.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369250.7Link to Ensembl Protein Viewer:ENSP00000358253.3Re-query CCDS DB by Nucleotide ID:ENST00000369250Re-query CCDS DB by Protein ID:ENSP00000358253
Original member Current member NCBI NM_001135051.2 NP_001128523.1 Accepted alive Link to Nucleotide Sequence:NM_001135051.2Link to Protein Sequence:NP_001128523.1Re-query CCDS DB by Nucleotide ID:NM_001135051Re-query CCDS DB by Protein ID:NP_001128523Link to BLAST:NP_001128523.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128523.1 738 Q5W0V3-2 738 100% 0 0

Chromosomal Locations for CCDS 44480.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 114822079 114822123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114830852 114830930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114833233 114833402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114835537 114835641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114836124 114836246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114842933 114843226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114843741 114843937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114845367 114845481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114846013 114846089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114846175 114846367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114846559 114846728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114847090 114847233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114848647 114848737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114855197 114855340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114860749 114860889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114861231 114861334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114899490 114899514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGTTCTCCAAGTTCACCTCCATCCTGCAGCACGCCGTGGAGGCGCTTGCACCTTCTCTTCCTTTACAAG
AAGATTTTGTTTATCACTGGAAGGCAATTACCCATTACTACATAGAGACTTCAGATGATAAAGCCCCAGT
GACCGATACAAATATTCCATCGCATCTGGAACAGATGTTAGATATACTGGTTCAAGAAGAAAATGAACGG
GAATCTGGAGAGACAGGGCCATGTATGGAATATTTGCTTCATCACAAGATCTTGGAAACATTATATACCT
TGGGGAAAGCTGATTGTCCTCCGGGAATGAAACAGCAGGTTTTGGTTTTCTATACGAAACTTCTGGGAAG
AATCCGGCAGCCACTACTTCCACACATTAACGTGCACAGGCCAGTGCAGAAATTAATTAGACTCTGTGGT
GAAGTCCTAGCAACACCAACAGAAAATGAAGAGATTCAGTTTCTTTGCATTGTGTGTGCGAAGCTGAAAC
AGGACCCCTACCTGGTTAACTTTTTCCTAGAGAATAAGATGAAATCATTGGCTTCCAAAGGAGTACCAAA
TGTAATTTCAGAAGATACATTAAAAGGTCAGGATTCCTTGTCAACAGATACAGGACAGTCCCGTCAACCA
GAGGAACTATCTGGTGCTACTGGAATGGAGCAAACAGAATTGGAAGATGAGCCTCCTCATCAGATGGATC
ACCTGTCCACAAGCTTGGATAACCTCAGTGTCACCTCACTGCCAGAGGCCTCGGTTGTTTGTCCAAATCA
GGATTACAATTTAGTGAATTCTTTGTTAAATCTTACTAGAAGTCCTGATGGCAGAATAGCTGTGAAGGCA
TGTGAAGGCTTGATGCTGTTAGTAAGTTTGCCAGAGCCTGCGGCTGCAAAGTGCCTTACACAGAGCACTT
GCTTGTGTGAACTACTGACAGACAGACTTGCCTCCCTGTACAAGGCCCTACCTCAGTCAGTGGATCCGTT
AGATATTGAAACCGTGGAAGCAATTAACTGGGGCTTGGACTCATATAGTCATAAAGAAGATGCTTCAGCA
TTTCCAGGAAAACGAGCCTTAATTTCATTTCTTTCCTGGTTTGATTATTGTGATCAGCTCATTAAGGAAG
CCCAAAAGACTGCTGCTGTTGCTCTTGCCAAAGCTGTTCATGAAAGATTTTTCATTGGTGTTATGGAACC
TCAATTAATGCAAACTTCTGAGATGGGTATTCTCACATCCACTGCTCTGCTTCATCGCATCGTTCGGCAA
GTGACCTCTGATGTTTTGCTTCAAGAAATGGTGTTTTTTATCCTTGGAGAACAGAGGGAACCAGAAACTC
TGGCAGAAATCAGCAGACATCCTTTAAGGCATAGGTTAATTGAACATTGTGATCACATATCTGATGAGAT
AAGCATAATGACATTACGAATGTTTGAACATCTTTTACAAAAACCCAATGAGCACATTCTTTACAACTTG
GTCTTGAGAAATCTTGAAGAAAGAAATTATACAGAATATAAACCTTTGTGCCCAGAAGATAAAGATGTGG
TAGAAAATGGATTGATAGCAGGAGCAGTAGATCTGGAAGAAGATCCATTATTTACTGACATTTCACCAGA
AAACACTTTGCCAAACCAAGAGTGGCTTAGTTCTTCACCTCCTGCTACTCCAGACCACCCCAAAAATGAT
GGAAAAACTGAAGTTCATAAAATTGTAAATAGTTTTCTCTGTCTGGTACCGGATGACGCAAAATCCTCCT
ACCATGTTGAGGGCACAGGATATGACACTTACCTCCGAGACGCTCATAGGCAGTTCCGAGACTACTGTGC
TATCTGCTTAAGATGGGAGTGGCCTGGGTCTCCAAAAGCATTGGAAAAGTGCAATTTAGAAGCTGCTTTC
TTTGAAGGTCATTTTTTGAAAGTGCTGTTCGACAGAATGGGAAGAATTCTTGATCAGCCATATGATGTAA
ACTTACAAGTAACCTCAGTGTTATCTAGACTTTCTCTCTTCCCTCATCCACACATCCACGAGTACCTTTT
GGATCCTTACGTGAACCTCGCTCCTGGCTGTAGATCTCTCTTCTCTGTAATTGTCAGGGTTGTTGGAGAC
CTTATGCTTCGAATCCAGCGTATTCAAGACTTTACTCCCAAGCTTCTGTTAGTCAGAAAGCGGTTACTTG
GTTTGGAACCTGAAGGCCCTATGCAGACGTTGCCTTCATGGTGGTAA

Translation (738 aa):
MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQMLDILVQEENER
ESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLVFYTKLLGRIRQPLLPHINVHRPVQKLIRLCG
EVLATPTENEEIQFLCIVCAKLKQDPYLVNFFLENKMKSLASKGVPNVISEDTLKGQDSLSTDTGQSRQP
EELSGATGMEQTELEDEPPHQMDHLSTSLDNLSVTSLPEASVVCPNQDYNLVNSLLNLTRSPDGRIAVKA
CEGLMLLVSLPEPAAAKCLTQSTCLCELLTDRLASLYKALPQSVDPLDIETVEAINWGLDSYSHKEDASA
FPGKRALISFLSWFDYCDQLIKEAQKTAAVALAKAVHERFFIGVMEPQLMQTSEMGILTSTALLHRIVRQ
VTSDVLLQEMVFFILGEQREPETLAEISRHPLRHRLIEHCDHISDEISIMTLRMFEHLLQKPNEHILYNL
VLRNLEERNYTEYKPLCPEDKDVVENGLIAGAVDLEEDPLFTDISPENTLPNQEWLSSSPPATPDHPKND
GKTEVHKIVNSFLCLVPDDAKSSYHVEGTGYDTYLRDAHRQFRDYCAICLRWEWPGSPKALEKCNLEAAF
FEGHFLKVLFDRMGRILDQPYDVNLQVTSVLSRLSLFPHPHIHEYLLDPYVNLAPGCRSLFSVIVRVVGD
LMLRIQRIQDFTPKLLLVRKRLLGLEPEGPMQTLPSWW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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