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Report for CCDS44836.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44836.1 Public Homo sapiens 12 GSG1 24 110 108 CCDS HistoryNCBI Gene:83445Re-query CCDS DB by CCDS ID:44836.1Re-query CCDS DB by GeneID:83445See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44836.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000351606.10 ENSP00000336857.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000351606.10Link to Ensembl Protein Viewer:ENSP00000336857.6Re-query CCDS DB by Nucleotide ID:ENST00000351606Re-query CCDS DB by Protein ID:ENSP00000336857
Original member Current member NCBI NM_001080554.4 NP_001074023.1 Accepted alive Link to Nucleotide Sequence:NM_001080554.4Link to Protein Sequence:NP_001074023.1Re-query CCDS DB by Nucleotide ID:NM_001080554Re-query CCDS DB by Protein ID:NP_001074023Link to BLAST:NP_001074023.1

Chromosomal Locations for CCDS 44836.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 13085148 13085243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13087152 13087263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13087907 13088059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13088738 13088909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13089208 13089276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13090503 13090818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 13103465 13103512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGAGCGATCCCTCTCAACTGACTCAAAATGTTTGCCTCACCCAGGAGATGGAGCTCTCGAAGGCCTTCT
CTGGCCAGCGGACACTCCTATCTGCCATCCTCAGCATGCTATCACTCAGCTTCTCCACAACATCCCTGCT
CAGCAACTACTGGTTTGTGGGCACACAGAAGGTGCCCAAGCCCCTGTGCGAGAAAGGTCTGGCAGCCAAG
TGCTTTGACATGCCAGTGTCCCTGGATGGAGATACCAACACATCCACCCAGGAGGTGGTACAATACAACT
GGGAGACTGGGGATGACCGGTTCTCCTTCCGGAGCTTCCGGAGTGGCATGTGGCTATCCTGTGAGGAAAC
TGTGGAAGAACCAGCACTGCTCCATCCCCAGTCCTGGAAACAATTTAGAGCCCTTCGGTCCAGTGGTACA
GCGGCAGCAAAAGGGGAGAGGTGCCGAAGTTTCATTGAACTTACACCACCAGCCAAGAGAGGTGAGAAAG
GACTACTGGAATTTGCCACGTTGCAAGGCCCATGTCACCCCACTCTCCGATTTGGAGGGAAGCGGTTGAT
GGAGAAGGCTTCCCTCCCCTCCCCTCCCTTGGGGCTTTGTGGCAAAAATCCTATGGTTATCCCTGGGAAC
GCAGATCACCTACATCGGACTTCAATTCATCAGCTTCCTCCTGCTACTAACAGACTTGCTACTCACTGGG
AACCCTGCCTGTGGGCTCAAACTGAGCGCCTTTGCTGCTGTTTCCTCTGTCCTGTCAGGTCTCCTGGGGA
TGGTGGCCCACATGATGTATTCACAAGTCTTCCAAGCGACTGTCAACTTGGGTCCAGAAGACTGGAGACC
ACATGTTTGGAATTATGGCTGGGCCTTCTACATGGCCTGGCTCTCCTTCACCTGCTGCATGGCGTCGGCT
GTCACCACCTTCAACACGTACACCAGGATGGTGCTGGAGTTCAAGTGCAAGCATAG

Translation (321 aa):
MSDPSQLTQNVCLTQEMELSKAFSGQRTLLSAILSMLSLSFSTTSLLSNYWFVGTQKVPKPLCEKGLAAK
CFDMPVSLDGDTNTSTQEVVQYNWETGDDRFSFRSFRSGMWLSCEETVEEPALLHPQSWKQFRALRSSGT
AAAKGERCRSFIELTPPAKRGEKGLLEFATLQGPCHPTLRFGGKRLMEKASLPSPPLGLCGKNPMVIPGN
ADHLHRTSIHQLPPATNRLATHWEPCLWAQTERLCCCFLCPVRSPGDGGPHDVFTSLPSDCQLGSRRLET
TCLELWLGLLHGLALLHLLHGVGCHHLQHVHQDGAGVQVQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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