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Report for CCDS44857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44857.1 Public Homo sapiens 12 DENND5B 24 110 108 CCDS HistoryNCBI Gene:160518Re-query CCDS DB by CCDS ID:44857.1Re-query CCDS DB by GeneID:160518See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44857.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389082.10 ENSP00000373734.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389082.10Link to Ensembl Protein Viewer:ENSP00000373734.5Re-query CCDS DB by Nucleotide ID:ENST00000389082Re-query CCDS DB by Protein ID:ENSP00000373734
Original member Current member NCBI NM_144973.4 NP_659410.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144973.4Link to Protein Sequence:NP_659410.3Re-query CCDS DB by Nucleotide ID:NM_144973Re-query CCDS DB by Protein ID:NP_659410Link to BLAST:NP_659410.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659410.3 1274 Q6ZUT9-1 1274 100% 0 0

Chromosomal Locations for CCDS 44857.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 31387603 31387786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31389324 31389498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31392267 31392393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31392614 31392696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31398175 31398362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31399654 31399772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31402498 31402643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31409263 31409384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31413436 31413564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31415367 31415448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31423597 31423675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31424535 31424687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31426293 31426424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31433155 31433248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31442775 31442925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31447538 31447769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31451940 31452476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31460194 31460381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31479589 31480255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31495810 31495919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 31590706 31590832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3825 nt):
ATGAGCGGGAGCTGCGCGGCGCCCGGCCCGGGCTCGGGCTCCTCCCCGGCCGCCTGCCGCTTCGCGCACT
ACTTCGTGCTGTGCGGGATCGACGCGGACAGCGGGCTGGAGCCTGACGAGCTGGCGGGCGAAAATTTTGA
CCAGAGTCCTTTGAGAAGAACATTCAAATCCAAAGTTCTCGCCCACTATCCTCAGAATATAGAATGGAAC
CCTTTTGATCAAGATGCGGTGAACATGTTGTGCATGCCTAAAGGGCTATCTTTCAGGACACAAACGGACA
ATAAAGACCCCCAGTTTCACTCATTTATAATTACCAGGGAAGATGGTTCTCGCACCTATGGTTTTGTTCT
CACTTTTTATGAAGAAGTTACAAGTAAGCAAATCTGCACAGCAATGCAGACACTTTACCAGATGCACAAC
GCTGAGCATTACAGCAGTGTGTATGCTTCATCTTCCTGCAGTATGGACTCATTGGCAAGTAGTCTTGATG
AAGGAGATACAACTTCCCTTTTGAAACTCCAGCGATACAACTCCTATGATATTAGCAGAGACACCCTGTA
TGTTTCAAAAAGTATATGCTTGATCACACCGTTACCATTCATGCAGGCCTGCAAGAAATTCCTTATCCAG
CTTTACAAGGCTGTTACCTCACAGCAGCCACCACCCTTGCCACTTGAAAGCTATATCCACAATATTCTTT
ATGAAGTACCCCTTCCACCTCCAGGGAGGTCACTGAAATTTTATGGTGTTTATGAACCTGTCATCTGCCA
GAGGCCTGGGCCCAGTGAACTCCCCCTCTCTGATTACCCCCTTCGGGAGGCATTTGAGCTCCTGGGATTA
GAGAACCTGGTGCAGGTGTTTACCTGTGTTCTTTTAGAGATGCAAATCCTTCTCTACTCACAAGATTATC
AACGCCTGATGACTGTGGCAGAAGGCATCACCACACTTTTGTTCCCATTTCAATGGCAACATGTTTATGT
GCCCATTCTACCTGCTTCTCTGCTACATTTTCTTGATGCTCCTGTCCCTTATCTGATGGGCCTTCAGTCA
AAAGAAGGAACTGACCGTTCTAAACTAGAACTTCCTCAAGAGGCTAATTTGTGTTTTGTGGACATTGACA
ACCATTTTATTGAGTTGCCTGAAGAATTTCCACAGTTCCCCAATAAAGTGGATTTTATCCAAGAACTCTC
TGAGGTTCTTGTTCAATTTGGGATCCCTCCTGAGGGCAGCCTACATTGCAGTGAGAGTACCAGCAAACTG
AAGAATATGGTTCTGAAAGACTTGGTCAATGACAAAAAGAACGGCAATGTCTGTACTAATAACATCAGCA
TGTATGAGTTACTGAAGGGCAATGAAACCATAGCCCGCTTGCAGGCTCTGGCCAAGCGTACTGGTGTGGC
TGTGGAAAAAATGGACCTCTCTGCTTCTCTGGGTGAAAAAGACAAGGATTTAAAACTGCATTGTGAAGAG
GCAGAACTAAGGGACTACCAGCTCAATGTACAGCTCCGAGAGGTCTTTGCTAACCGTTTTACACAGATGT
TTGCAGATTACGAAGCATTTGTCATTCAGACTGCCCAGGACATGGAATCCTGGCTGACCAACCGGGAACA
GATGCAGAACTTTGACAAAGCTTCCTTTCTGTCTGACCAGCCTGAGCCTTACCTGCCATTTCTTTCACGC
TTCATTGAAACACAGATGTTTGCCACCTTTATTGATAATAAAATTATGTCTCAGTGGGAAGAGAAAGATC
CTTTGCTTCGGGTCTTTGACACTCGGATTGATAAGATAAGGCTGTATAATGTAAGGGCACCCACCTTGCG
GACATCTATATATCAGAAATGCAGCACTTTAAAAGAAGCAGCCCAATCAATTGAGCAGAGACTGATGAAA
ATGGATCACACTGCAATCCACCCACATCTACTTGATATGAAAATTGGTCAAGGCAAATATGAGCAGGGGT
TCTTTCCAAAGTTACAGTCCGATGTCTTGGCAACAGGACCAACCAGTAACAATCGCTGGGTAAGTCGGAG
TGCCACTGCACAGCGCAGGAAAGAACGCCTTCGCCAGCATTCTGAGCATGTTGGGCTGGACAACGACTTG
AGGGAGAAATATATGCAAGAGGCACGAAGTTTAGGAAAAAACCTGAGGCAACCCAAACTGTCAGACCTCT
CTCCTGCAGTTATTGCACAGACCAACTGTAAATTCGTAGAAGGCTTATTAAAAGAATGTAGAATGAAGAC
AAAGCGCATGTTGGTGGAGAAGATGGGACATGAAGCGGTGGAACTTGGCCATGGAGAAGCAAACATCACC
GGCCTGGAGGAGAACACCTTGATCGCCAGCCTTTGTGACCTGCTGGAGAGGATATGGAGCCATGGCTTGC
AGGTCAAGCAGGGGAAGTCGGCTTTGTGGTCACATTTAATTCAATTTCAGGACAGAGAAGAGAAACAAGA
GCACCTTGCAGAATCACCAGTTGCCCTCGGACCAGAAAGAAGAAAATCTGACTCAGGAGTTATGTTGCCA
ACGCTCAGGGTCTCTCTTATTCAGGACATGAGGCATATTCAAAACATGAGTGAGATCAAGACTGATGTTG
GACGAGCTCGGGCGTGGATAAGACTGTCTCTAGAAAAGAAGCTCTTGTCCCAGCATCTTAAGCAGTTGCT
TTCTAACCAACCACTCACCAAGAAGCTTTATAAGCGATATGCTTTTCTACGTTGCGAAGAAGAAAGAGAG
CAGTTTCTTTACCACCTTCTTTCTCTCAATGCTGTGGACTATTTCTGCTTCACCAGTGTGTTCACCACTA
TCATGATTCCGTATAGGTCAGTGATCATCCCAATCAAAAAGCTGAGCAATGCAATAATCACATCAAACCC
TTGGATCTGTGTATCAGGAGAGCTGGGAGACACAGGAGTAATGCAGATTCCCAAAAACCTCCTCGAAATG
ACCTTTGAGTGCCAGAACTTGGGGAAGCTGACCACTGTTCAGATTGGTCACGATAACTCAGGACTGTTAG
CCAAATGGCTAGTGGATTGTGTCATGGTCAGAAATGAAATCACAGGACATACATACAGATTCCCATGTGG
GCGGTGGCTGGGGAAAGGCATTGATGATGGGAGCCTGGAGAGAATTCTTATTGGAGAGTTGATGACATCA
GCATCAGATGAAGATCTAGTAAAGCAGTGTCGGACTCCACCCCAGCAGAAGTCACCCACCACGGCTAGGA
GATTGAGCATCACTTCACTGACAGGAAAAAACAACAAACCCAATGCTGGGCAGATACAAGAAGGAATTGG
AGAAGCTGTGAACAATATTGTGAAACATTTTCATAAACCTGAAAAAGAGAGAGGAAGCCTCACCGTGTTG
CTGTGTGGAGAAAATGGCCTGGTTGCAGCCCTTGAGCAAGTTTTCCACCATGGGTTCAAATCTGCCCGCA
TCTTTCACAAGAATGTCTTCATCTGGGACTTCATAGAGAAAGTGGTTGCTTATTTTGAAACAACTGACCA
GATTCTAGATAATGAAGATGATGTCCTTATTCAGAAATCATCCTGCAAAACCTTCTGCCACTACGTAAAT
GCTATTAATACTGCACCCAGGAACATTGGGAAGGATGGCAAATTCCAGATTTTAGTTTGCCTTGGAACAA
GGGATCGCCTGCTCCCACAGTGGATTCCATTGTTAGCTGAGTGTCCTGCCATCACTCGAATGTATGAAGA
GAGCGCTCTCCTGCGAGACCGCATGACTGTCAACTCCCTTATCCGAATTCTGCAGACCATTCAGGACTTC
ACCATAGTCCTAGAAGGATCACTCATCAAAGGAGTGGATGTGTAA

Translation (1274 aa):
MSGSCAAPGPGSGSSPAACRFAHYFVLCGIDADSGLEPDELAGENFDQSPLRRTFKSKVLAHYPQNIEWN
PFDQDAVNMLCMPKGLSFRTQTDNKDPQFHSFIITREDGSRTYGFVLTFYEEVTSKQICTAMQTLYQMHN
AEHYSSVYASSSCSMDSLASSLDEGDTTSLLKLQRYNSYDISRDTLYVSKSICLITPLPFMQACKKFLIQ
LYKAVTSQQPPPLPLESYIHNILYEVPLPPPGRSLKFYGVYEPVICQRPGPSELPLSDYPLREAFELLGL
ENLVQVFTCVLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPVPYLMGLQS
KEGTDRSKLELPQEANLCFVDIDNHFIELPEEFPQFPNKVDFIQELSEVLVQFGIPPEGSLHCSESTSKL
KNMVLKDLVNDKKNGNVCTNNISMYELLKGNETIARLQALAKRTGVAVEKMDLSASLGEKDKDLKLHCEE
AELRDYQLNVQLREVFANRFTQMFADYEAFVIQTAQDMESWLTNREQMQNFDKASFLSDQPEPYLPFLSR
FIETQMFATFIDNKIMSQWEEKDPLLRVFDTRIDKIRLYNVRAPTLRTSIYQKCSTLKEAAQSIEQRLMK
MDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLATGPTSNNRWVSRSATAQRRKERLRQHSEHVGLDNDL
REKYMQEARSLGKNLRQPKLSDLSPAVIAQTNCKFVEGLLKECRMKTKRMLVEKMGHEAVELGHGEANIT
GLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLIQFQDREEKQEHLAESPVALGPERRKSDSGVMLP
TLRVSLIQDMRHIQNMSEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQPLTKKLYKRYAFLRCEEERE
QFLYHLLSLNAVDYFCFTSVFTTIMIPYRSVIIPIKKLSNAIITSNPWICVSGELGDTGVMQIPKNLLEM
TFECQNLGKLTTVQIGHDNSGLLAKWLVDCVMVRNEITGHTYRFPCGRWLGKGIDDGSLERILIGELMTS
ASDEDLVKQCRTPPQQKSPTTARRLSITSLTGKNNKPNAGQIQEGIGEAVNNIVKHFHKPEKERGSLTVL
LCGENGLVAALEQVFHHGFKSARIFHKNVFIWDFIEKVVAYFETTDQILDNEDDVLIQKSSCKTFCHYVN
AINTAPRNIGKDGKFQILVCLGTRDRLLPQWIPLLAECPAITRMYEESALLRDRMTVNSLIRILQTIQDF
TIVLEGSLIKGVDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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