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Report for CCDS44869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44869.1 Public Homo sapiens 12 KANSL2 24 110 108 CCDS HistoryNCBI Gene:54934Re-query CCDS DB by CCDS ID:44869.1Re-query CCDS DB by GeneID:54934See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420613.7 ENSP00000415436.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000420613.7Link to Ensembl Protein Viewer:ENSP00000415436.3Re-query CCDS DB by Nucleotide ID:ENST00000420613Re-query CCDS DB by Protein ID:ENSP00000415436
Original member Current member NCBI NM_017822.4 NP_060292.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017822.4Link to Protein Sequence:NP_060292.3Re-query CCDS DB by Nucleotide ID:NM_017822Re-query CCDS DB by Protein ID:NP_060292Link to BLAST:NP_060292.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060292.3 492 Q9H9L4-1 492 100% 0 0

Chromosomal Locations for CCDS 44869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48654044 48654175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48654941 48655060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48660366 48660619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48667693 48667789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48669106 48669272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48671799 48671962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48679036 48679150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48679655 48679833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48681382 48681632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGAACAGGATTCGGATTCACGTCTTGCCAACCAATCGGGGGAGGATCACTCCAGTGCCCAGGTCTCAGG
AACCTCTGTCTTGTGCATTCACTCATCGTCCATGCTCTCACCCTCGTCTGGAGGGGCAGGAGTTTTGCAT
TAAGCATATCCTTGAAGACAAGAATGCACCCTTCAAGCAGTGTAGTTATATATCGACGAAGAATGGAAAA
AGATGTCCCAATGCTGCCCCAAAGCCAGAGAAGAAAGATGGGGTGTCCTTCTGTGCTGAACATGTCCGTA
GGAATGCCCTGGCACTTCATGCTCAAATGAAGAAGACCAACCCAGGGCCTGTGGGTGAAACACTCCTGTG
CCAGCTGAGCTCATATGCTAAGACAGAGCTGGGGTCTCAGACTCCAGAAAGTAGTCGCAGTGAAGCCAGC
CGAATACTAGATGAAGACAGCTGGAGTGATGGGGAGCAGGAACCCATTACTGTGGATCAGACATGGAGAG
GTGACCCTGACAGTGAAGCTGATAGCATAGACAGTGATCAAGAAGATCCCCTAAAACATGCTGGTGTCTA
CACAGCAGAAGAAGTGGCCCTGATTATGCGTGAAAAGCTAATTCGTTTGCAGTCGTTGTATATTGATCAG
TTTAAACGACTTCAGCATCTGCTCAAGGAGAAGAAGCGCCGATACTTACATAATCGCAAAGTGGAACATG
AAGCTCTAGGCAGTAGTCTCCTGACTGGCCCAGAGGGACTTTTGGCCAAAGAACGAGAGAACTTAAAGCG
ATTAAAATGTCTGCGACGATACCGCCAGCGCTATGGAGTGGAAGCCTTACTGCATAGGCAGTTGAAGGAA
CGGAGAATGCTGGCCACAGATGGTGCTGCCCAACAGGCCCATACCACTCGTTCCAGTCAGAGGTGCTTGG
CCTTTGTGGATGATGTTCGTTGTTCCAATCAGTCTCTTCCAATGACCAGACACTGCCTTACCCATATTTG
TCAGGATACGAATCAGGTTCTCTTCAAGTGCTGCCAGGGATCTGAAGAGGTACCCTGCAACAAACCTGTT
CCTGTAAGCCTCTCTGAGGATCCCTGCTGCCCACTGCATTTCCAGTTGCCTCCTCAGATGTATAAGCCCG
AGCAGGTACTGTCTGTGCCAGACGATCTGGAAGCCGGCCCCATGGATCTGTACTTGAGTGCTGCTGAGCT
TCAGCCCACTGAGAGTTTACCTCTGGAGTTCAGTGATGACTTGGATGTTGTGGGTGATGGTATGCAGTGT
CCTCCTTCACCTTTGCTTTTTGATCCTTCACTAACCCTTGAAGATCATTTAGTCAAAGAAATTGCTGAAG
ACCCAGTGGATATTTTGGGCCAGATGCAGATGGCTGGAGATGGGTGCAGATCCCAGGGATCTCGAAATTC
TGAGAAAGCCTCTGCACCATTGTCTCAGAGTGGATTGGCTACTGCAAATGGGAAGCCAGAACCCACTTCT
ATTAGTTGA

Translation (492 aa):
MNRIRIHVLPTNRGRITPVPRSQEPLSCAFTHRPCSHPRLEGQEFCIKHILEDKNAPFKQCSYISTKNGK
RCPNAAPKPEKKDGVSFCAEHVRRNALALHAQMKKTNPGPVGETLLCQLSSYAKTELGSQTPESSRSEAS
RILDEDSWSDGEQEPITVDQTWRGDPDSEADSIDSDQEDPLKHAGVYTAEEVALIMREKLIRLQSLYIDQ
FKRLQHLLKEKKRRYLHNRKVEHEALGSSLLTGPEGLLAKERENLKRLKCLRRYRQRYGVEALLHRQLKE
RRMLATDGAAQQAHTTRSSQRCLAFVDDVRCSNQSLPMTRHCLTHICQDTNQVLFKCCQGSEEVPCNKPV
PVSLSEDPCCPLHFQLPPQMYKPEQVLSVPDDLEAGPMDLYLSAAELQPTESLPLEFSDDLDVVGDGMQC
PPSPLLFDPSLTLEDHLVKEIAEDPVDILGQMQMAGDGCRSQGSRNSEKASAPLSQSGLATANGKPEPTS
IS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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