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Report for CCDS44956.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44956.1 Public Homo sapiens 12 NEDD1 24 110 108 CCDS HistoryNCBI Gene:121441Re-query CCDS DB by CCDS ID:44956.1Re-query CCDS DB by GeneID:121441See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44956.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457368.2 ENSP00000407964.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457368.2Link to Ensembl Protein Viewer:ENSP00000407964.2Re-query CCDS DB by Nucleotide ID:ENST00000457368Re-query CCDS DB by Protein ID:ENSP00000407964
Original member Current member EBI ENST00000411739.6 ENSP00000411307.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000411739.6Link to Ensembl Protein Viewer:ENSP00000411307.2Re-query CCDS DB by Nucleotide ID:ENST00000411739Re-query CCDS DB by Protein ID:ENSP00000411307
Original member Current member NCBI NM_001135177.2 NP_001128649.1 Accepted alive Link to Nucleotide Sequence:NM_001135177.2Link to Protein Sequence:NP_001128649.1Re-query CCDS DB by Nucleotide ID:NM_001135177Re-query CCDS DB by Protein ID:NP_001128649Link to BLAST:NP_001128649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128649.1 571 Q8NHV4-2 571 100% 0 0

Chromosomal Locations for CCDS 44956.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 96917657 96917737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96919985 96920125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96934976 96935205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96936611 96936812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96937198 96937393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96940409 96940537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96942577 96942624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96943560 96943762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96944639 96944795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96945693 96945849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96951432 96951498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 96951949 96952053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGTATTTGGTAAGCGGAGGCCTAAATAACACTGTTAATATTTGGGATTTAAAATCAAAAAGAGTTCATC
GATCTCTTAAGGATCATAAAGATCAAGTAACTTGTGTAACATACAATTGGAATGATTGCTACATTGCTTC
TGGATCTCTTAGTGGTGAAATTATTTTACACAGTGTAACCACTAATTTATCTAGTACTCCTTTTGGCCAT
GGTAGTAACCAGTCTGTTCGGCACTTGAAGTACTCCTTGTTTAAGAAATCACTACTGGGCAGTGTTTCGG
ATAATGGAATAGTAACTCTCTGGGATGTAAATAGTCAGAGTCCATACCATAACTTTGACAGTGTACACAA
AGCTCCAGCGTCAGGCATCTGTTTTTCTCCTGTCAATGAATTGCTCTTTGTAACCATAGGCTTGGATAAA
AGAATCATCCTCTATGACACTTCAAGTAAGAAGCTAGTGAAAACTTTAGTGGCTGACACTCCTCTAACTG
CGGTAGATTTCATGCCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGGGGGAAAATATATCAATATGA
TTTAAGAATGTTGAAATCACCAGTTAAGACCATCAGTGCTCACAAGACATCTGTGCAGTGTATAGCATTT
CAGTACTCCACTGTTCTTACTAAGTCAAGTTTAAATAAAGGCTGTTCAAATAAGCCCACAACAGTGAACA
AACGAAGTGTTAATGTGAATGCTGCTAGTGGAGGAGTTCAGAATTCCGGAATTGTCAGAGAAGCACCTGC
CACGTCCATTGCCACAGTTCTACCACAACCTATGACATCAGCTATGGGGAAAGGAACAGTTGCTGTTCAA
GAAAAAGCAGGTTTGCCTCGAAGCATAAACACAGACACTTTATCTAAGGAAACAGACAGTGGAAAAAATC
AGGATTTCTCCAGCTTTGATGATACTGGGAAAAGTAGTTTAGGTGACATGTTCTCACCTATCAGAGATGA
TGCTGTAGTTAACAAGGGAAGTGATGAGTCCATAGGCAAAGGAGATGGCTTTGACTTTCTACCGCAGTTG
AACTCAGTGTTTCCTCCAAGAAAAAATCCAGTAACTTCAAGTACTTCAGTATTGCATTCTAGTCCTCTTA
ATGTTTTTATGGGATCTCCAGGGAAAGAGGAAAATGAAAACCGTGATCTAACAGCTGAGTCTAAGAAAAT
ATATATGGGAAAACAGGAATCTAAAGACTCCTTCAAACAGTTAGCAAAGTTGGTCACATCTGGTGCTGAA
AGTGGAAATCTAAATACCTCTCCATCATCTAACCAAACAAGAAATTCTGAGAAATTTGAAAAGCCAGAGA
ATGAAATTGAAGCCCAGTTGATATGTGAACCCCCAATCAATGGATCCTCAACTCCAAATCCAAAGATAGC
ATCTTCTGTCACTGCTGGAGTTGCCAGTTCACTCTCAGAAAAAATAGCCGACAGCATTGGAAATAACCGG
CAAAATGCACCATTGACTTCCATTCAAATTCGTTTTATTCAGAACATGATACAGGAAACGTTGGATGACT
TTAGAGAAGCATGCCATAGGGACATTGTGAATTTGCAAGTGGAGATGATTAAACAGTTTCATATGCAACT
GAATGAAATGCATTCTTTGCTGGAAAGATACTCAGTGAATGAAGGTTTAGTGGCTGAAATTGAAAGACTA
CGAGAAGAAAACAAAAGATTACGGGCCCACTTTTGA

Translation (571 aa):
MYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGH
GSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDK
RIILYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAF
QYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQ
EKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLGDMFSPIRDDAVVNKGSDESIGKGDGFDFLPQL
NSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQESKDSFKQLAKLVTSGAE
SGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPINGSSTPNPKIASSVTAGVASSLSEKIADSIGNNR
QNAPLTSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERL
REENKRLRAHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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