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Report for CCDS4521.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4521.1 Public Homo sapiens 6 ADTRP 24 110 108 CCDS HistoryNCBI Gene:84830Re-query CCDS DB by CCDS ID:4521.1Re-query CCDS DB by GeneID:84830See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4521.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414691.8 ENSP00000404416.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000414691.8Link to Ensembl Protein Viewer:ENSP00000404416.2Re-query CCDS DB by Nucleotide ID:ENST00000414691Re-query CCDS DB by Protein ID:ENSP00000404416
Original member Current member NCBI NM_032744.4 NP_116133.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032744.4Link to Protein Sequence:NP_116133.1Re-query CCDS DB by Nucleotide ID:NM_032744Re-query CCDS DB by Protein ID:NP_116133Link to BLAST:NP_116133.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116133.1 230 Q96IZ2-1 230 100% 0 0

Chromosomal Locations for CCDS 4521.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 11714478 11714512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11723349 11723500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11735568 11735683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11766274 11766375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11768249 11768383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 11778607 11778759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (693 nt):
ATGACGAAGACTTCTACATGCATATACCACTTCCTTGTTCTGAGCTGGTATACTTTCCTCAATTATTACA
TCTCACAGGAAGGAAAAGACGAGGTGAAACCCAAAATCTTGGCAAATGGTGCAAGGTGGAAATATATGAC
GCTGCTTAATCTGCTCTTGCAGACCATTTTCTACGGGGTCACCTGCCTGGATGATGTGCTGAAAAGAACC
AAAGGGGGAAAAGACATTAAGTTCCTAACTGCCTTCAGAGACCTGCTTTTCACCACTCTGGCTTTTCCTG
TATCCACGTTTGTATTTTTGGCATTCTGGATCCTCTTTCTCTACAATCGAGATCTCATTTACCCCAAGGT
CCTAGATACTGTCATCCCCGTGTGGCTGAATCATGCAATGCACACTTTCATATTCCCCATCACATTGGCT
GAAGTCGTCCTCAGGCCTCACTCCTATCCATCAAAGAAGACAGGACTCACCTTGCTGGCTGCTGCCAGCA
TTGCTTACATCAGCCGCATCCTATGGCTCTACTTTGAGACGGGTACCTGGGTGTATCCTGTGTTTGCCAA
ACTCAGCCTCTTGGGTCTAGCAGCTTTCTTCTCTCTCAGCTACGTCTTCATCGCCAGCATCTACCTACTT
GGAGAGAAGCTCAACCACTGGAAATGGGGTGACATGAGGCAGCCACGGAAGAAGAGGAAGTAA

Translation (230 aa):
MTKTSTCIYHFLVLSWYTFLNYYISQEGKDEVKPKILANGARWKYMTLLNLLLQTIFYGVTCLDDVLKRT
KGGKDIKFLTAFRDLLFTTLAFPVSTFVFLAFWILFLYNRDLIYPKVLDTVIPVWLNHAMHTFIFPITLA
EVVLRPHSYPSKKTGLTLLAAASIAYISRILWLYFETGTWVYPVFAKLSLLGLAAFFSLSYVFIASIYLL
GEKLNHWKWGDMRQPRKKRK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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