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Report for CCDS45317.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45317.1 Public Homo sapiens 15 DNAJA4 24 110 108 CCDS HistoryNCBI Gene:55466Re-query CCDS DB by CCDS ID:45317.1Re-query CCDS DB by GeneID:55466See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45317.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446172.2 ENSP00000413499.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446172.2Link to Ensembl Protein Viewer:ENSP00000413499.2Re-query CCDS DB by Nucleotide ID:ENST00000446172Re-query CCDS DB by Protein ID:ENSP00000413499
Original member Current member NCBI NM_001130183.2 NP_001123655.1 Accepted alive Link to Nucleotide Sequence:NM_001130183.2Link to Protein Sequence:NP_001123655.1Re-query CCDS DB by Nucleotide ID:NM_001130183Re-query CCDS DB by Protein ID:NP_001123655Link to BLAST:NP_001123655.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123655.1 370 Q8WW22-3 370 100% 0 0

Chromosomal Locations for CCDS 45317.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78266243 78266293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78270497 78270677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78273095 78273199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78274197 78274424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78275498 78275728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78280045 78280145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78280245 78280460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGTGGGAAAGCCTGACCCTGGATTCAGGTCAAATCTCAGCACTCACAAGATTTAAACTCATATCCCAGG
CATATGAAGTGCTTTCAGATCCAAAGAAAAGGGATGTTTATGACCAAGGCGGAGAGCAGGCAATTAAAGA
AGGAGGCTCAGGCAGCCCCAGCTTCTCTTCACCCATGGACATCTTTGACATGTTCTTTGGTGGTGGTGGA
CGGATGGCTAGAGAGAGAAGAGGCAAGAATGTTGTACACCAGTTATCTGTAACTCTTGAAGATCTATATA
ATGGAGTCACGAAGAAATTGGCCCTCCAGAAAAATGTAATTTGTGAGAAATGTGAAGGTGTTGGTGGGAA
GAAGGGATCGGTGGAGAAGTGCCCGCTGTGCAAGGGGCGGGGGATGCAGATCCACATCCAGCAGATCGGG
CCGGGCATGGTACAGCAGATCCAGACCGTGTGCATCGAGTGCAAGGGCCAGGGTGAGCGCATCAACCCCA
AGGACCGCTGCGAGAGCTGCAGCGGGGCCAAGGTGATCCGTGAGAAGAAGATTATCGAGGTACATGTTGA
AAAAGGTATGAAAGATGGGCAAAAGATACTATTTCATGGAGAAGGAGATCAGGAGCCTGAGCTGGAGCCT
GGTGATGTCATAATTGTGCTTGATCAGAAGGATCATAGTGTCTTTCAGAGACGAGGCCATGACTTGATCA
TGAAAATGAAAATTCAGCTTTCTGAAGCTCTTTGTGGCTTCAAGAAGACGATAAAAACATTGGACAATCG
AATTCTTGTTATTACATCCAAAGCAGGTGAGGTGATAAAGCACGGGGACCTGAGATGCGTGCGCGATGAA
GGAATGCCCATCTACAAAGCACCCCTGGAAAAAGGGATTCTGATCATACAGTTTTTAGTAATCTTTCCTG
AAAAACACTGGCTTTCTCTGGAAAAGCTTCCTCAGCTGGAAGCTTTACTCCCTCCTCGACAGAAAGTGAG
GATTACAGATGACATGGATCAGGTGGAGCTGAAGGAGTTTTGTCCCAATGAGCAGAACTGGCGTCAGCAC
AGGGAGGCCTACGAGGAGGACGAAGACGGGCCCCAGGCTGGAGTGCAGTGCCAGACGGCATGA

Translation (370 aa):
MWESLTLDSGQISALTRFKLISQAYEVLSDPKKRDVYDQGGEQAIKEGGSGSPSFSSPMDIFDMFFGGGG
RMARERRGKNVVHQLSVTLEDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIG
PGMVQQIQTVCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELEP
GDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDE
GMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDMDQVELKEFCPNEQNWRQH
REAYEEDEDGPQAGVQCQTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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