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Report for CCDS45480.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45480.1 Public Homo sapiens 16 CNEP1R1 24 110 108 CCDS HistoryNCBI Gene:255919Re-query CCDS DB by CCDS ID:45480.1Re-query CCDS DB by GeneID:255919See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45480.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458059.7 ENSP00000405635.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458059.7Link to Ensembl Protein Viewer:ENSP00000405635.3Re-query CCDS DB by Nucleotide ID:ENST00000458059Re-query CCDS DB by Protein ID:ENSP00000405635
Original member Current member NCBI NM_153261.6 NP_694993.2 Accepted alive Link to Nucleotide Sequence:NM_153261.6Link to Protein Sequence:NP_694993.2Re-query CCDS DB by Nucleotide ID:NM_153261Re-query CCDS DB by Protein ID:NP_694993Link to BLAST:NP_694993.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694993.2 142 Q8N9A8-2 142 100% 0 0

Chromosomal Locations for CCDS 45480.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 50025316 50025340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50025651 50025701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50026396 50026467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50029725 50029798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50033397 50033506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50034102 50034156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50035417 50035458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGAACTCGCTGGAGCAGGCGGAAGCCCCGCGAGTTGTATCCCTGATTCCTGCGGTGGTTTCCGGTAACT
GCCAAGATCTCAAGGCTTTTGAGAGGAGACTTACTGAATATATTCATTGTTTGCAACCTGCTACTGGACG
CTGGAGAATGCTTCTTATAGTGGTATCTGTCTGTACAGCTACTGGTGCCTGGAACTGGTTAATAGACCCT
GAGACACAAAAGGTGTCCTTCTTCACATCATTATGGAATCACCCATTTTTCACCATTAGCTGTATCACTC
TAATAGGCTTGTTCTTTGCTGGAATACACAAGAGAGTAGTTGCACCATCAATTATAGCTGCTCGATGTCG
AACGGTATTAGCAGAATACAATATGTCTTGTGATGATACAGGAAAACTAATTTTGAAACCTAGGCCTCAT
GTTCAATGA

Translation (142 aa):
MNSLEQAEAPRVVSLIPAVVSGNCQDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDP
ETQKVSFFTSLWNHPFFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRPH
VQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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