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Report for CCDS45661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45661.1 Public Homo sapiens 17 EPOP 24 110 108 CCDS HistoryNCBI Gene:100170841Re-query CCDS DB by CCDS ID:45661.1Re-query CCDS DB by GeneID:100170841See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000621654.2 ENSP00000484710.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621654.2Link to Ensembl Protein Viewer:ENSP00000484710.1Re-query CCDS DB by Nucleotide ID:ENST00000621654Re-query CCDS DB by Protein ID:ENSP00000484710
Original member Current member NCBI NM_001130677.2 NP_001124149.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130677.2Link to Protein Sequence:NP_001124149.1Re-query CCDS DB by Nucleotide ID:NM_001130677Re-query CCDS DB by Protein ID:NP_001124149Link to BLAST:NP_001124149.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124149.1 379 A6NHQ4 379 100% 0 0

Chromosomal Locations for CCDS 45661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 38673356 38674495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGAGACCCTGTGCCCTGCGCCCCGCCTGGCAGTGCCGGCGTCCCCGCGAGGGTCGCCCTGCTCCCCCA
CGCCCCGGAAGCCGTGTCGGGGGACCCAGGAATTCTCTCCGCTGTGCCTGCGTGCCCTCGCCTTCTGCGC
CCTTGCCAAGCCCCGGGCGTCCTCTCTGGGCCCGGGGCCTGGGGAGCTGGCGGCGCGGTCCCCAGTGCTG
CGGGGCCCTCAGGCCCCCCTGCGCCCTGGCGGCTGGGCCCCGGATGGCCTGAAGCACCTCTGGGCACCGA
CCGGGCGGCCCGGCGTTCCTAACACCGCCGCCGGCGAGGATGCGGACGTCGCAGCGTGCCCCCGCCGCGG
AGAGGAGGAAGAGGGCGGAGGCGGTTTCCCGCACTTCGGCGTTCGCTCCTGTGCACCTCCGGGCCGCTGC
CCTGCGCCCCCGCACCCTCGGGAATCTACGACCAGCTTCGCCTCGGCCCCGCCTCGCCCGGCCCCGGGTC
TCGAGCCTCAGCGTGGCCCAGCCGCCAGCCCGCCTCAGGAACCCAGTTCCCGGCCTCCGTCGCCACCTGC
GGGCCTCTCCACCGAGCCCGCGGGTCCCGGGACGGCGCCGCGGCCGTTCCTGCCCGGCCAGCCTGCCGAA
GTCGATGGAAACCCCCCGCCGGCCGCCCCCGAGGCTCCAGCGGCCAGCCCCTCGACGGCCAGCCCGGCTC
CGGCCGCACCCGGAGATCTCCGCCAGGAACATTTCGATCGTCTGATCCGCCGGTCGAAACTTTGGTGTTA
CGCGAAGGGCTTCGCCTTGGACACTCCGAGTTTGCGCCGGGGGCCAGAGCGGCCGCCTGCGAAAGGGCCG
GCTCGGGGAGCCGCCAAGAAACGCCGGCTGCCGGCGCCCCCTCCGCGCACCGCGCAGCCCCGCCGCCCTG
CACCGACGCTCCCCACCACGAGCACCTTCAGCCTCCTCAACTGCTTCCCCTGCCCCCCGGCCCTGGTGGT
GGGGGAAGACGGAGACCTAAAGCCGGCATCCTCGCTTCGCCTCCAGGGAGACTCTAAGCCCCCGCCCGCC
CACCCGCTGTGGAGGTGGCAGATGGGGGGTCCCGCTGTCCCTGAGCCCCCTGGCCTCAAATTCTGGGGGA
TCAACATGGATGAAAGCTGA

Translation (379 aa):
METLCPAPRLAVPASPRGSPCSPTPRKPCRGTQEFSPLCLRALAFCALAKPRASSLGPGPGELAARSPVL
RGPQAPLRPGGWAPDGLKHLWAPTGRPGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFGVRSCAPPGRC
PAPPHPRESTTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPRPFLPGQPAE
VDGNPPPAAPEAPAASPSTASPAPAAPGDLRQEHFDRLIRRSKLWCYAKGFALDTPSLRRGPERPPAKGP
ARGAAKKRRLPAPPPRTAQPRRPAPTLPTTSTFSLLNCFPCPPALVVGEDGDLKPASSLRLQGDSKPPPA
HPLWRWQMGGPAVPEPPGLKFWGINMDES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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