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Report for CCDS45787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45787.1 Public Homo sapiens 17 METTL23 24 110 108 CCDS HistoryNCBI Gene:124512Re-query CCDS DB by CCDS ID:45787.1Re-query CCDS DB by GeneID:124512See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 45787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341249.11 ENSP00000341543.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000341249.11Link to Ensembl Protein Viewer:ENSP00000341543.5Re-query CCDS DB by Nucleotide ID:ENST00000341249Re-query CCDS DB by Protein ID:ENSP00000341543
Original member Current member EBI ENST00000615984.4 ENSP00000482599.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615984.4Link to Ensembl Protein Viewer:ENSP00000482599.1Re-query CCDS DB by Nucleotide ID:ENST00000615984Re-query CCDS DB by Protein ID:ENSP00000482599
Original member Current member NCBI NM_001080510.5 NP_001073979.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080510.5Link to Protein Sequence:NP_001073979.3Re-query CCDS DB by Nucleotide ID:NM_001080510Re-query CCDS DB by Protein ID:NP_001073979Link to BLAST:NP_001073979.3
Original member Current member NCBI NM_001206983.3 NP_001193912.1 Accepted alive Link to Nucleotide Sequence:NM_001206983.3Link to Protein Sequence:NP_001193912.1Re-query CCDS DB by Nucleotide ID:NM_001206983Re-query CCDS DB by Protein ID:NP_001193912Link to BLAST:NP_001193912.1
Original member Current member NCBI NM_001206984.3 NP_001193913.1 Accepted alive Link to Nucleotide Sequence:NM_001206984.3Link to Protein Sequence:NP_001193913.1Re-query CCDS DB by Nucleotide ID:NM_001206984Re-query CCDS DB by Protein ID:NP_001193913Link to BLAST:NP_001193913.1
Original member Current member NCBI NM_001302703.2 NP_001289632.1 Accepted alive Link to Nucleotide Sequence:NM_001302703.2Link to Protein Sequence:NP_001289632.1Re-query CCDS DB by Nucleotide ID:NM_001302703Re-query CCDS DB by Protein ID:NP_001289632Link to BLAST:NP_001289632.1
Original member Current member NCBI NM_001378348.1 NP_001365277.1 Accepted alive Link to Nucleotide Sequence:NM_001378348.1Link to Protein Sequence:NP_001365277.1Re-query CCDS DB by Nucleotide ID:NM_001378348Re-query CCDS DB by Protein ID:NP_001365277Link to BLAST:NP_001365277.1
Original member Current member NCBI NM_001378349.1 NP_001365278.1 Accepted alive Link to Nucleotide Sequence:NM_001378349.1Link to Protein Sequence:NP_001365278.1Re-query CCDS DB by Nucleotide ID:NM_001378349Re-query CCDS DB by Protein ID:NP_001365278Link to BLAST:NP_001365278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073979.3 190 Q86XA0-1 190 100% 0 0
NP_001193912.1 190 Q86XA0-1 190 100% 0 0
NP_001193913.1 190 Q86XA0-1 190 100% 0 0
NP_001289632.1 190 Q86XA0-1 190 100% 0 0
NP_001365277.1 190 Q86XA0-1 190 100% 0 0
NP_001365278.1 190 Q86XA0-1 190 100% 0 0

Chromosomal Locations for CCDS 45787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 76729711 76729794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76732978 76733215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76733293 76733377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 76733521 76733686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGTATGTTTGGCCCTGTGCTGTGGTCCTGGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCCAGGCA
AGGCCATCTTAGAGATTGGAGCTGGAGTGAGCCTTCCAGGAATTTTGGCTGCCAAATGTGGTGCAGAAGT
AATACTGTCAGACAGCTCAGAACTGCCTCACTGTCTGGAAGTCTGTCGGCAAAGCTGCCAAATGAATAAC
CTGCCACATCTGCAGGTGGTAGGACTAACATGGGGTCATATATCTTGGGATCTTCTGGCTCTACCACCAC
AAGATATTATCCTTGCATCTGATGTGTTCTTTGAACCAGAAGATTTTGAAGACATTTTGGCTACAATATA
TTTTTTGATGCACAAGAATCCCAAGGTCCAATTGTGGTCTACTTATCAAGTTAGGAGTGCTGACTGGTCA
CTTGAAGCTTTACTCTACAAATGGGATATGAAATGTGTCCACATTCCTCTTGAGTCTTTTGATGCAGACA
AAGAAGATATAGCAGAATCTACCCTTCCAGGAAGACATACAGTTGAAATGCTGGTCATTTCCTTTGCAAA
GGACAGTCTCTGA

Translation (190 aa):
MYVWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAKCGAEVILSDSSELPHCLEVCRQSCQMNN
LPHLQVVGLTWGHISWDLLALPPQDIILASDVFFEPEDFEDILATIYFLMHKNPKVQLWSTYQVRSADWS
LEALLYKWDMKCVHIPLESFDADKEDIAESTLPGRHTVEMLVISFAKDSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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