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Report for CCDS4598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4598.1 Public Homo sapiens 6 H4C6 24 110 108 CCDS HistoryNCBI Gene:8361Re-query CCDS DB by CCDS ID:4598.1Re-query CCDS DB by GeneID:8361See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244537.6 ENSP00000244537.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244537.6Link to Ensembl Protein Viewer:ENSP00000244537.6Re-query CCDS DB by Nucleotide ID:ENST00000244537Re-query CCDS DB by Protein ID:ENSP00000244537
Original member Current member NCBI NM_003540.4 NP_003531.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003540.4Link to Protein Sequence:NP_003531.1Re-query CCDS DB by Nucleotide ID:NM_003540Re-query CCDS DB by Protein ID:NP_003531Link to BLAST:NP_003531.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003531.1 103 P62805 103 100% 0 0

Chromosomal Locations for CCDS 4598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 26240426 26240737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGTCTGGTAGAGGCAAAGGTGGTAAAGGTTTAGGAAAGGGAGGCGCCAAGCGCCATCGCAAAGTGCTGC
GTGACAACATACAGGGCATCACGAAGCCCGCCATCCGTCGCTTGGCCCGACGCGGCGGCGTGAAACGCAT
TTCGGGCCTCATTTATGAGGAGACCCGCGGTGTTCTTAAGGTGTTCCTGGAGAATGTGATACGGGACGCC
GTAACCTACACGGAGCACGCCAAGCGTAAGACAGTCACTGCAATGGATGTTGTCTACGCGCTCAAGCGCC
AGGGACGCACTCTGTACGGCTTTGGTGGCTGA

Translation (103 aa):
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDA
VTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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