NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46098.1 Public Homo sapiens 19 ZNF222 24 110 108 CCDS HistoryNCBI Gene:7673Re-query CCDS DB by CCDS ID:46098.1Re-query CCDS DB by GeneID:7673See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391960.4 ENSP00000375822.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391960.4Link to Ensembl Protein Viewer:ENSP00000375822.2Re-query CCDS DB by Nucleotide ID:ENST00000391960Re-query CCDS DB by Protein ID:ENSP00000375822
Original member Current member NCBI NM_001129996.2 NP_001123468.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001129996.2Link to Protein Sequence:NP_001123468.1Re-query CCDS DB by Nucleotide ID:NM_001129996Re-query CCDS DB by Protein ID:NP_001123468Link to BLAST:NP_001123468.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123468.1 491 Q9UK12-2 491 100% 0 0

Chromosomal Locations for CCDS 46098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44025437 44025478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44027023 44027149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44027398 44027490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44031817 44033030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGATCGATTCAGGAGAAAAGAAGCCTGGGCGGAGAGCAGAGGAGGCAGTGACCTTCAAGGATGTGGCTG
TGATCTTCACTGAGGAGGAGCTGGGGCTGCTGGACCCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCT
TGAGAACTTCAGGAACCTGCTCTCAGTGGGGCATCAACCATTCCATGGAGATACTTTCCACTTCCTAAGG
GAAGAAAAGTTTTGGGTGATGGGGACAACAAGCCAAAGAGAAGGGAATTTGGGAGGCAAGATCCAAACTG
AGATGGAGACTGTTCCAGAAGCAGGAACACATGAAGAATTTTCCTGCAAGCAAATTTGGGAACAAATTGC
AAGTGACTTAACCAGGTCTCAAGATACCACCATAAGTAACTCTCAGTTATTTGAACAAGATGACAACCCC
TCCCAGATTAAAGCAAGACTATCTACAGTTCACACAAGAGAAAAACCTTTCCAGGGTGAAAATTGTAAAC
AGTTCTTCAGTGATGTTTCCTTCTTTGATCTTCCTCAGCAGTTATATTCAGGAGAGAAGTCTCATACCTG
TGATGAGTGTGGAAAAAGCTTCTGTTACATCTCAGCCCTTCATATTCATCAGAGGGTCCACATGGGAGTG
AAATGCTATAAGTGTGATGTGTGTGGTAAGGAATTTAGTCAGAGCTCACGTCTGCAAACTCATCAAAGAG
TCCACACTGGAGAGAAACCATTCAAATGTGAGCAGTGTGGGAAAGGCTTCAGATGTAGATCAGCACTTAA
AGTTCATTGCAAATTACACATGAGAGAGAAACCTTATAATTGTGAGAAATGTGGGAAGGCTTTCATGCAC
AATTTCCAGCTTCAGAAACATCACAGAATTCATACTGGGGAGAAGCCATTCAAATGTGAAATATGTGGTA
AGAGCTTCTGTCTTAGGTCAAGTCTTAATAGGCATTGCATGGTCCACACAGCAGAGAAACTGTACAAATC
TGAAAAGTATGGAAGAGGTTTCATTGATAGGCTAGATTTGCATAAGCATCAGATGATTCATATGGGACAG
AAACCATATAATTGTAAAGAATGTGGGAAGAGCTTCAAATGGTCCTCATATCTTTTGGTCCATCAACGAG
TCCACACTGGAGAAAAGCCATACAAATGTGAGGAGTGTGGGAAGGGCTACATTAGTAAGTCAGGTCTTGA
CTTCCACCATAGAACCCACACGGGAGAGAGATCTTATAACTGTGATAACTGCGGGAAGAGCTTTAGACAT
GCTTCTAGTATTTTGAATCATAAGAAACTCCACTGCCAAAGAAAGCCATTGAAATGTGAAGACTGTGGAA
AGAGGCTTGTATGCCGGTCATACTGTAAAGACCAACAAAGAGACCACAGTGGAGAAAACCCATCCAAATG
TGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTGGATATAATTTTATCATTATTTTTAAATGAC
ATATAA

Translation (491 aa):
MIDSGEKKPGRRAEEAVTFKDVAVIFTEEELGLLDPAQRKLYRDVMLENFRNLLSVGHQPFHGDTFHFLR
EEKFWVMGTTSQREGNLGGKIQTEMETVPEAGTHEEFSCKQIWEQIASDLTRSQDTTISNSQLFEQDDNP
SQIKARLSTVHTREKPFQGENCKQFFSDVSFFDLPQQLYSGEKSHTCDECGKSFCYISALHIHQRVHMGV
KCYKCDVCGKEFSQSSRLQTHQRVHTGEKPFKCEQCGKGFRCRSALKVHCKLHMREKPYNCEKCGKAFMH
NFQLQKHHRIHTGEKPFKCEICGKSFCLRSSLNRHCMVHTAEKLYKSEKYGRGFIDRLDLHKHQMIHMGQ
KPYNCKECGKSFKWSSYLLVHQRVHTGEKPYKCEECGKGYISKSGLDFHHRTHTGERSYNCDNCGKSFRH
ASSILNHKKLHCQRKPLKCEDCGKRLVCRSYCKDQQRDHSGENPSKCEDCGKRYKRRLNLDIILSLFLND
I


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH