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Report for CCDS46163.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46163.1 Public Homo sapiens 19 ZNF766 24 110 108 CCDS HistoryNCBI Gene:90321Re-query CCDS DB by CCDS ID:46163.1Re-query CCDS DB by GeneID:90321See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46163.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439461.6 ENSP00000409652.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000439461.6Link to Ensembl Protein Viewer:ENSP00000409652.1Re-query CCDS DB by Nucleotide ID:ENST00000439461Re-query CCDS DB by Protein ID:ENSP00000409652
Original member Current member NCBI NM_001010851.3 NP_001010851.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010851.3Link to Protein Sequence:NP_001010851.1Re-query CCDS DB by Nucleotide ID:NM_001010851Re-query CCDS DB by Protein ID:NP_001010851Link to BLAST:NP_001010851.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010851.1 468 Q5HY98 468 100% 0 0

Chromosomal Locations for CCDS 46163.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52269614 52269631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52282111 52282237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52283285 52283413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52290066 52291198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1407 nt):
ATGGCGCAACTGCGGCGCGGACACTTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGA
AATGCCTGGACCCTGTGCAGAAGGCTTTATACAGGGATGTGATGTTGGAGAACTACAGGAACCTGGTCTC
CCTGGGAATCTGTCTTCCTGACCTGAGTATTATCTCCATGATGAAGCAAAGGACAGAGCCCTGGACTGTG
GAGAATGAAATGAAAGTAGCAAAAAATCCAGATAGGTGGGAAGGTATCAAAGATATCAACACAGGGAGGA
GCTGTGCAGTGAGAAGCAAAGCAGGAAACAAGCCTATTACAAATCAACTTGGATTAACCTTTCAGTTACC
TCTGCCAGAACTGGAGATATTTCAAGGTGAAGGGAAGATTTATGAATGTAATCAAGTTCAAAAGTTCATC
AGCCACAGTTCTTCAGTTTCGCCACTTCAAAGAATTTACTCTGGGGTCAAAACCCACATATTTAATAAAC
ATAGGAATGATTTTGTTGATTTTCCATTGCTGTCACAAGAACAGAAAGCACACATTAGGAGAAAACCTTA
CGAATGTAATGAGCAGGGCAAAGTCTTCAGAGTGTCTTCAAGCCTTCCTAATCATCAAGTAATCCACACT
GCAGATAAACCTAACAGATGTCATGAATGTGGTAAAACCGTCAGGGACAAGTCAGGCCTCGCAGAACATT
GGAGAATTCGTACAGGAGAGAAACCTTACAAATGTAAAGAGTGTGGCAAGCTCTTCAATCGAATTGCATA
CCTTGCACGACACGAGAAAGTGCATACTGGAGAGAGTCCTTACAAATGTAATGAGTGTGGCAAGGTCTTC
AGTCGAATTACATACCTTGTACGACATCAGAAAATTCATACTAGAGAGAAACCTCATAAATGTAACAAAT
GTGGCAAGGTTTATAGTAGCAGTTCATACCTAGCACAACATTGGAGAATTCATACAGGAGAGAAACTTTA
CAAATGTAATAAATGTGGCAAAGAATTTAGTGGGCATTCAAGCCTCACCACCCATCTGTTAATCCACACT
GGAGAGAAACCTTACAAATGTAAAGAATGTGACAAAGCTTTTAGGCACAAGTTCTCCCTGACAGTTCATC
AGAGAAATCATAATGGAGAGAAACCTTATAAATGTCATGAATGTGGCAAAGTCTTCACTCAAGTTTCACA
TCTTGCACGACATCAGAAAATTCACACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAAGTCTTC
ACTCAGAATTCACACCTTGCAAATCATCAGAGAATCCACACTGGAGAGAAACCTTACAAATGCCATGTGT
GTGGTAAGGTCTTTAGGCACAGTTCATGGTTTGTACAGCATCAGAGAAGTGTTCATGAGAGAGTCCTTAC
AAACTGA

Translation (468 aa):
MAQLRRGHLTFRDVAIEFSQEEWKCLDPVQKALYRDVMLENYRNLVSLGICLPDLSIISMMKQRTEPWTV
ENEMKVAKNPDRWEGIKDINTGRSCAVRSKAGNKPITNQLGLTFQLPLPELEIFQGEGKIYECNQVQKFI
SHSSSVSPLQRIYSGVKTHIFNKHRNDFVDFPLLSQEQKAHIRRKPYECNEQGKVFRVSSSLPNHQVIHT
ADKPNRCHECGKTVRDKSGLAEHWRIRTGEKPYKCKECGKLFNRIAYLARHEKVHTGESPYKCNECGKVF
SRITYLVRHQKIHTREKPHKCNKCGKVYSSSSYLAQHWRIHTGEKLYKCNKCGKEFSGHSSLTTHLLIHT
GEKPYKCKECDKAFRHKFSLTVHQRNHNGEKPYKCHECGKVFTQVSHLARHQKIHTGEKPYKCNECGKVF
TQNSHLANHQRIHTGEKPYKCHVCGKVFRHSSWFVQHQRSVHERVLTN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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