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Report for CCDS46489.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46489.1 Public Homo sapiens 2 TMEM237 24 110 108 CCDS HistoryNCBI Gene:65062Re-query CCDS DB by CCDS ID:46489.1Re-query CCDS DB by GeneID:65062See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46489.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409883.7 ENSP00000386264.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409883.7Link to Ensembl Protein Viewer:ENSP00000386264.2Re-query CCDS DB by Nucleotide ID:ENST00000409883Re-query CCDS DB by Protein ID:ENSP00000386264
Original member Current member NCBI NM_001044385.3 NP_001037850.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001044385.3Link to Protein Sequence:NP_001037850.1Re-query CCDS DB by Nucleotide ID:NM_001044385Re-query CCDS DB by Protein ID:NP_001037850Link to BLAST:NP_001037850.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001037850.1 408 Q96Q45-1 408 100% 0 0

Chromosomal Locations for CCDS 46489.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201624255 201624322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201626026 201626147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201627321 201627414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201628076 201628149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201629230 201629421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201629729 201629852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201632051 201632208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201633311 201633431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201636748 201636885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201638989 201639045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201640261 201640265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201640893 201640924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201643359 201643400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGAGGACTGACTCGGGGGCTCGGCTGGAGGAGGGCCACCTGCGTCCTCCACGAGCTCTTCCACCTGTGC
CAAGTCAAGATGATATTCCACTTAGTCGTCCTAAGAAAAAGAAGCCCAGAACAAAAAACACACCAGCAAG
TGCTTCTTTGGAAGGCCTTGCTCAGACTGCTGGTCGAAGGCCCTCTGAGGGCAATGAGCCATCAACTAAA
GAACTCAAAGAGCACCCAGAGGCTCCTGTTCAAAGAAGACAGAAAAAGACAAGGCTACCTCTTGAATTGG
AGACTTCCTCCACCCAAAAGAAGTCATCTAGTTCATCTTTATTACGAAATGAAAATGGTATTGATGCGGA
GCCAGCTGAGGAGGCAGTTATTCAAAAACCTCGGAGGAAGACAAAGAAAACCCAGCCAGCAGAATTACAG
TATGCCAATGAGCTAGGAGTAGAAGATGAAGACATAATCACTGATGAGCAAACTACTGTGGAACAGCAGT
CTGTATTCACTGCACCCACTGGCATTAGCCAGCCTGTAGGCAAAGTATTTGTGGAAAAAAGCCGGAGATT
CCAGGCTGCTGATCGTTCAGAGTTGATAAAGACCACAGAAAACATAGATGTGTCAATGGACGTGAAGCCT
TCCTGGACCACCAGAGATGTGGCACTTACAGTGCACCGGGCTTTCAGGATGATTGGTCTCTTTTCTCATG
GATTCTTGGCTGGCTGTGCTGTGTGGAATATTGTTGTGATATATGTTCTAGCAGGAGATCAGCTATCCAA
CCTCTCAAACCTTCTGCAACAATACAAGACCCTAGCGTATCCATTCCAGAGTCTTCTGTACTTGCTTTTG
GCTCTGAGTACAATTTCAGCTTTTGACAGGATTGACTTTGCTAAAATATCAGTAGCAATCCGAAATTTTT
TGGCCCTGGATCCTACAGCTTTAGCATCTTTCTTGTACTTTACTGCTCTTATACTATCTCTGAGTCAGCA
AATGACAAGTGACAGAATCCACCTTTACACACCTTCTTCTGTTAATGGTAGCCTCTGGGAAGCAGGAATT
GAGGAACAGATTCTCCAGCCATGGATTGTGGTGAATCTCGTGGTGGCTCTTCTGGTTGGATTATCTTGGC
TATTTTTGTCTTATAGGCCAGGCATGGATCTTAGTGAAGAGTTAATGTTCTCCTCAGAGGTGGAAGAATA
TCCTGATAAAGAGAAAGAAATCAAAGCCTCTTCATAA

Translation (408 aa):
MRTDSGARLEEGHLRPPRALPPVPSQDDIPLSRPKKKKPRTKNTPASASLEGLAQTAGRRPSEGNEPSTK
ELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEPAEEAVIQKPRRKTKKTQPAELQ
YANELGVEDEDIITDEQTTVEQQSVFTAPTGISQPVGKVFVEKSRRFQAADRSELIKTTENIDVSMDVKP
SWTTRDVALTVHRAFRMIGLFSHGFLAGCAVWNIVVIYVLAGDQLSNLSNLLQQYKTLAYPFQSLLYLLL
ALSTISAFDRIDFAKISVAIRNFLALDPTALASFLYFTALILSLSQQMTSDRIHLYTPSSVNGSLWEAGI
EEQILQPWIVVNLVVALLVGLSWLFLSYRPGMDLSEELMFSSEVEEYPDKEKEIKASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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