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Report for CCDS46524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46524.1 Public Homo sapiens 2 MOGAT1 24 110 108 CCDS HistoryNCBI Gene:116255Re-query CCDS DB by CCDS ID:46524.1Re-query CCDS DB by GeneID:116255See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46524.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446656.4 ENSP00000406674.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000446656.4Link to Ensembl Protein Viewer:ENSP00000406674.3Re-query CCDS DB by Nucleotide ID:ENST00000446656Re-query CCDS DB by Protein ID:ENSP00000406674
Original member Current member NCBI NM_058165.3 NP_477513.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_058165.3Link to Protein Sequence:NP_477513.2Re-query CCDS DB by Nucleotide ID:NM_058165Re-query CCDS DB by Protein ID:NP_477513Link to BLAST:NP_477513.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_477513.2 335 Q96PD6 335 100% 0 0

Chromosomal Locations for CCDS 46524.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 222671786 222671879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222688344 222688522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222689265 222689469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222694362 222694536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222695089 222695288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 222709736 222709890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGAAGGTAGAGTTTGCACCGCTCAACATCCAGCTGGCGCGGCGGCTGCAGACGGTGGCCGTGCTGCAGT
GGGTCCTGAAATACCTGCTGCTCGGGCCGATGTCCATTGGAATCACTGTGATGCTGATCATACACAACTA
TTTGTTCCTTTACATCCCTTATTTGATGTGGCTTTACTTTGACTGGCATACCCCAGAGCGAGGAGGCAGG
AGATCCAGCTGGATCAAAAATTGGACTCTTTGGAAACACTTTAAGGACTATTTTCCAATTCATCTTATCA
AAACTCAAGATTTGGATCCAAGTCACAACTATATATTTGGGTTTCACCCCCATGGAATAATGGCAGTTGG
AGCCTTTGGGAATTTTTCTGTAAATTATTCTGACTTCAAGGACCTGTTTCCTGGCTTTACTTCATATCTT
CACGTGCTGCCACTTTGGTTCTGGTGTCCTGTCTTTCGAGAATATGTGATGAGTGTTGGGCTGGTTTCAG
TTTCCAAGAAAAGTGTGTCCTACATGGTAAGCAAGGAGGGAGGTGGAAACATCTCTGTCATTGTCCTTGG
GGGTGCAAAAGAATCACTGGATGCTCATCCTGGAAAGTTCACTCTGTTCATCCGCCAGCGGAAAGGATTT
GTTAAAATTGCTTTGACCCATGGCGCCTCTCTGGTCCCAGTGGTTTCTTTTGGTGAAAATGAACTGTTTA
AACAAACTGACAACCCTGAAGGATCATGGATTAGAACTGTTCAGAATAAACTGCAGAAGATCATGGGGTT
TGCTTTGCCCCTGTTTCATGCCAGGGGAGTTTTTCAGTACAATTTTGGCCTAATGACCTATAGGAAAGCC
ATCCACACTGTTGTTGGCCGCCCGATCCCTGTTCGTCAGACTCTGAACCCGACCCAGGAGCAGATTGAGG
AGTTACATCAGACCTATATGGAGGAACTTAGGAAATTGTTTGAGGAACACAAAGGAAAGTATGGCATTCC
AGAGCACGAGACTCTTGTTTTAAAATGA

Translation (335 aa):
MKVEFAPLNIQLARRLQTVAVLQWVLKYLLLGPMSIGITVMLIIHNYLFLYIPYLMWLYFDWHTPERGGR
RSSWIKNWTLWKHFKDYFPIHLIKTQDLDPSHNYIFGFHPHGIMAVGAFGNFSVNYSDFKDLFPGFTSYL
HVLPLWFWCPVFREYVMSVGLVSVSKKSVSYMVSKEGGGNISVIVLGGAKESLDAHPGKFTLFIRQRKGF
VKIALTHGASLVPVVSFGENELFKQTDNPEGSWIRTVQNKLQKIMGFALPLFHARGVFQYNFGLMTYRKA
IHTVVGRPIPVRQTLNPTQEQIEELHQTYMEELRKLFEEHKGKYGIPEHETLVLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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