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Report for CCDS46539.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46539.1 Public Homo sapiens 2 C2orf72 24 110 108 CCDS HistoryNCBI Gene:257407Re-query CCDS DB by CCDS ID:46539.1Re-query CCDS DB by GeneID:257407See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46539.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373640.5 ENSP00000362743.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373640.5Link to Ensembl Protein Viewer:ENSP00000362743.4Re-query CCDS DB by Nucleotide ID:ENST00000373640Re-query CCDS DB by Protein ID:ENSP00000362743
Original member Current member NCBI NM_001144994.2 NP_001138466.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144994.2Link to Protein Sequence:NP_001138466.1Re-query CCDS DB by Nucleotide ID:NM_001144994Re-query CCDS DB by Protein ID:NP_001138466Link to BLAST:NP_001138466.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138466.1 295 A6NCS6 295 100% 0 0

Chromosomal Locations for CCDS 46539.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 231037566 231038199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231041296 231041409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 231046882 231047021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGGAGCGCGAGCTGGAGGCGCTGGCGGCCCGGCTTGCGCGCCCTGCCGAGCCGCCCTTCCAGGCGTTGG
TG
GAAGCGGCGGGGGGCCGCGGGCAGGTGCTGCTGGTGGGCGAGCTGTGGGAGCGCGAACAGAGCCGCGC
G
CTGCTGCGGGACTTCGCACGGGCGGTGTTCCCGCCGGAGCCAGGCGCGGCCAAGCCGGGCGGCGCGGCG
GCA
GAGGGCGCGGGGCCCGGGGCGGCGCGCGGGGCGCAGAGGGCGGCGAGGGCGGCTGGGGCGGCGGGGG
CG
GCGGCGGCGGCGGCGCGCGCCATCCGCTCGCCGCTGGTCTTCGTGCTGTGCCGCGCGTCGTCGCTGGC
C
GCCCGGGAGCCGCGGCGCCGCCTGCGGGAGATGCTGCGGGACGTGCGCGGCCGGCGGCGGGCCGGGGCG
GCG
CTGGTCGGGGTGCTGGTGGCCGAGGCCGGGCCAGAGGACGCGGTGGCGCCGGGGCTGCGGCTGCTGG
AG
GCGCTGTTGCGCGCCGTGTTCGGCCGCCAGGCGGGGGGGCCCGTGCAGGCGGCCGCCTACTGCCCCGG
C
CTCCCGGCCTCCTGCCTGGCCGTCCAGGCGGCCGCCTGCAGGGCCCTGCAAGCCGCCGGAGCCGGGCAA
CCA
GTGGAAGGAGCCTGGGAGAGGCCAGGCCTCCCCGGACTGCTAGCCTGCTTTTCCTGGGGTCCCTGGA
GC
CGGAGGAAGAACCAGGATGTTGCTGCCTGCAGAAGCTCAGCTCAGGAAGACTTCCAGGAACCTGAGGA
G
GAGCTGCCACTAACAGCCATATTTCCCAATGGAGACTGTGATGACCTTGGAAGGGGGTCAAAAGCCTGT
GAT
GGAGTCGTACACACTCCTGCTGAGCCCACCGGAGACTCAAGATGA


Translation (295 aa):
MERELEALAARLARPAEPPFQALVEAAGGRGQVLLVGELWEREQSRALLRDFARAVFPPEPGAAKPGGAA
A
EGAGPGAARGAQRAARAAGAAGAAAAAARAIRSPLVFVLCRASSLAAREPRRRLREMLRDVRGRRRAGA
A
LVGVLVAEAGPEDAVAPGLRLLEALLRAVFGRQAGGPVQAAAYCPGLPASCLAVQAAACRALQAAGAGQ
P
VEGAWERPGLPGLLACFSWGPWSRRKNQDVAACRSSAQEDFQEPEEELPLTAIFPNGDCDDLGRGSKAC
D
GVVHTPAEPTGDSR




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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