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Report for CCDS46807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46807.1 Public Homo sapiens 3 ZNF662 24 110 108 CCDS HistoryNCBI Gene:389114Re-query CCDS DB by CCDS ID:46807.1Re-query CCDS DB by GeneID:389114See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46807.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328199.6 ENSP00000329264.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328199.6Link to Ensembl Protein Viewer:ENSP00000329264.6Re-query CCDS DB by Nucleotide ID:ENST00000328199Re-query CCDS DB by Protein ID:ENSP00000329264
Original member Current member NCBI NM_001134656.2 NP_001128128.1 Accepted alive Link to Nucleotide Sequence:NM_001134656.2Link to Protein Sequence:NP_001128128.1Re-query CCDS DB by Nucleotide ID:NM_001134656Re-query CCDS DB by Protein ID:NP_001128128Link to BLAST:NP_001128128.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128128.1 452 Q6ZS27-3 452 100% 0 0

Chromosomal Locations for CCDS 46807.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 42906352 42906441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42908022 42908148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42908796 42908909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42914327 42915354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGCGGCCGTGGCGCTGGCGAGCGGGACACGCCTCGGCCTTGTCCTCGAGCTGCTCCCGGGACAGCCCG
CGCTGCCCCGGGCGCGCCGGGAGTCAGTGACCTTCGAGGATGTGGCCGTCTACTTCTCTGAGAACGAATG
GATCGGCCTGGGCCCTGCTCAGAGAGCCCTGTACAGGGATGTGATGCTGGAGAATTATGGGGCTGTGGCT
TCCCTGGCATTTCCATTTCCCAAACCGGCTCTGATTTCCCAGCTGGAGCGAGGGGAAACACCCTGGTGCT
CGGTTCCTCGGGGAGCTCTGGATGGAGAGGCCCCAAGGGGCATCTCCTCAGAGGGTGTGTTGAAGAGGAA
GAAAGAAGATTTTATTCTGAAGGAGGAAATTATTGAGGAAGCACAGGACCTCATGGTCCTATCAAGTGGA
CCCCAGTGGTGTGGATCCCAGGAATTATGGTTTGGGAAAACCTGTGAAGAGAAAAGCAGGTTAGGGAGAT
GGCCTGGTTACCTCAATGGGGGACGTATGGAAAGTTCTACAAATGATATTATAGAAGTGATTGTCAAGGA
TGAGATGATCTCAGTAGAAGAGAGTTCAGGGAATACTGATGTCAATAACCTCCTTGGTATACATCACAAA
ATTCTAAATGAGCAAATATTCTATATATGTGAGGAATGCGGCAAGTGTTTTGATCAAAATGAGGACTTTG
ATCAACACCAGAAAACTCATAATGGAGAGAAGGTCTATGGATGTAAGGAATGTGGGAAGGCTTTCAGTTT
TCGATCACATTGCATTGCACATCAGAGAATTCACAGTGGGGTGAAACCCTATGAATGTCAAGAATGTGCT
AAGGCCTTTGTTTGGAAGTCAAACCTGATTCGTCACCAGAGAATACATACTGGAGAGAAACCCTTTGAAT
GTAAGGAATGTGGGAAGGGCTTTAGTCAGAACACAAGCCTTACGCAACATCAACGGATCCACACTGGTGA
GAAACCATACACATGTAAGGAATGTGGGAAAAGCTTTACTCGAAACCCAGCCCTTCTTCGACATCAGAGA
ATGCACACTGGGGAGAAGCCTTACGAATGTAAGGACTGTGGGAAGGGCTTCATGTGGAACTCAGATCTTT
CTCAGCACCAGAGGGTCCACACTGGGGACAAGCCTCATGAATGTACTGACTGTGGGAAAAGCTTCTTTTG
CAAGGCACATCTTATTCGACATCAAAGAATCCATACTGGGGAAAGACCCTATAAATGTAATGACTGTGGG
AAGGCCTTCAGTCAGAATTCTGTCTTAATTAAGCACCAGAGGCGCCATGCTAGAGACAAACCCTATAACT
GTCAGATCTCTCACCTTCTTGAACATTAG

Translation (452 aa):
MAAVALASGTRLGLVLELLPGQPALPRARRESVTFEDVAVYFSENEWIGLGPAQRALYRDVMLENYGAVA
SLAFPFPKPALISQLERGETPWCSVPRGALDGEAPRGISSEGVLKRKKEDFILKEEIIEEAQDLMVLSSG
PQWCGSQELWFGKTCEEKSRLGRWPGYLNGGRMESSTNDIIEVIVKDEMISVEESSGNTDVNNLLGIHHK
ILNEQIFYICEECGKCFDQNEDFDQHQKTHNGEKVYGCKECGKAFSFRSHCIAHQRIHSGVKPYECQECA
KAFVWKSNLIRHQRIHTGEKPFECKECGKGFSQNTSLTQHQRIHTGEKPYTCKECGKSFTRNPALLRHQR
MHTGEKPYECKDCGKGFMWNSDLSQHQRVHTGDKPHECTDCGKSFFCKAHLIRHQRIHTGERPYKCNDCG
KAFSQNSVLIKHQRRHARDKPYNCQISHLLEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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