CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS47237.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
47237.1 |
Public |
Homo sapiens |
5 |
POC5 |
24 |
110 |
108 |
|
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 47237.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000446329.6 |
ENSP00000399481.2 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_152408.3 |
NP_689621.2 |
|
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_689621.2 |
550 |
Q8NA72-3 |
550 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 47237.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1653 nt): ATGAAGTGGGAAGAATATGAAGAACTGCTTCATTATGCTATAGTGACTCCAAATATTGAACCCTGTGCTT CACAGTCATCTCATCCTAAGGGAGAATTGGTGCCAGATGTCAGAATTTCTACAATTCATGATATTCTTCA TAGTCAAGGAAATAACTCTGAAGTAAGAGAAACTGCAATAGAAGTTGGAAAAGGATGTGATTTCCATATT TCAAGTCATTCAAAGACAGATGAGTCATCACCAGTGTTATCGCCAAGGAAGCCTTCTCACCCAGTCATGG ATTTTTTCAGTTCACATCTTTTAGCTGACTCTTCCTCACCAGCAACAAATTCTAGTCATACAGATGCCCA TGAAATACTTGTGAGCGATTTTCTTGTTTCTGATGAAAACCTTCAGAAGATGGAAAATGTGCTTGATCTT TGGAGTTCAGGTCTTAAGACAAACATCATATCTGAACTAAGTAAATGGAGACTTAATTTTATTGACTGGC ACCGAATGGAAATGAGAAAAGAGAAAGAAAAACATGCAGCACATTTAAAACAACTGTGTAATCAGATCAA TGAATTGAAGGAGCTGCAAAAAACCTTTGAAATCTCCATTGGGAGAAAAGATGAGGTGATTTCTAGCTTG TCTCATGCCATAGGCAAGCAAAAGGAAAAGATAGAGTTGATGAGAACATTCTTCCACTGGCGAATCGGCC ATGTCAGAGCCAGACAGGATGTTTATGAAGGTAAACTAGCTGACCAGTACTACCAGAGAACTTTACTGAA GAAAGTCTGGAAAGTCTGGCGTTCCGTAGTGCAAAAGCAGTGGAAAGATGTGGTAGAAAGAGCTTGTCAA GCAAGAGCTGAAGAAGTTTGTATCCAGATTTCCAATGATTATGAAGCCAAAGTTGCTATGTTATCTGGAG CTTTGGAAAATGCAAAAGCTGAGATTCAAAGAATGCAACATGAAAAAGAGCACTTTGAAGATTCCATGAA AAAAGCTTTCATGAGGGGTGTATGTGCATTAAATCTTGAAGCCATGACTATATTTCAAAACAGAAATGAT GCAGGGATAGACTCCACAAATAATAAAAAGGAAGAGTATGGTCCTGGTGTTCAAGGAAAAGAACATTCTG CTCATTTGGATCCTTCAGCTCCTCCGATGCCCTTACCAGTTACATCACCACTGCTGCCATCCCCACCAGC CGCCGTCGGAGGAGCCAGCGCGACTGCCGTTCCCTCAGCTGCTTCGATGACTTCTACCAGGGCTGCTTCC GCATCTTCTGTTCACGTTCCTGTTTCTGCTCTTGGTGCAGGATCTGCAGCTACTGCTGCATCAGAAGAAA TGTATGTGCCAAGAGTTGTAACCTCTGCACAACAGAAAGCAGGAAGAACTATTACAGCCCGGATCACAGG AAGATGTGATTTTGCTTCAAAAAATAGAATTAGCAGCAGTTTAGCTATAATGGGAGTTTCTCCTCCCATG AGCTCAGTTGTTGTGGAAAAACATCATCCAGTCACAGTGCAAACCATTCCTCAAGCAACTGCAGCAAAAT ATCCCCGGACCATTCATCCTGAAAGTAGTACCTCAGCTTCCAGATCACTTGGAACCAGATCAGCTCACAC CCAGTCTCTCACAAGTGTTCATTCCATAAAAGTGGTTGACTAA
Translation (550 aa): MKWEEYEELLHYAIVTPNIEPCASQSSHPKGELVPDVRISTIHDILHSQGNNSEVRETAIEVGKGCDFHI SSHSKTDESSPVLSPRKPSHPVMDFFSSHLLADSSSPATNSSHTDAHEILVSDFLVSDENLQKMENVLDL WSSGLKTNIISELSKWRLNFIDWHRMEMRKEKEKHAAHLKQLCNQINELKELQKTFEISIGRKDEVISSL SHAIGKQKEKIELMRTFFHWRIGHVRARQDVYEGKLADQYYQRTLLKKVWKVWRSVVQKQWKDVVERACQ ARAEEVCIQISNDYEAKVAMLSGALENAKAEIQRMQHEKEHFEDSMKKAFMRGVCALNLEAMTIFQNRND AGIDSTNNKKEEYGPGVQGKEHSAHLDPSAPPMPLPVTSPLLPSPPAAVGGASATAVPSAASMTSTRAAS ASSVHVPVSALGAGSAATAASEEMYVPRVVTSAQQKAGRTITARITGRCDFASKNRISSSLAIMGVSPPM SSVVVEKHHPVTVQTIPQATAAKYPRTIHPESSTSASRSLGTRSAHTQSLTSVHSIKVVD
|