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Report for CCDS47380.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47380.1 Public Homo sapiens 6 KIF13A 24 110 108 CCDS HistoryNCBI Gene:63971Re-query CCDS DB by CCDS ID:47380.1Re-query CCDS DB by GeneID:63971See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47380.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378814.9 ENSP00000368091.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378814.9Link to Ensembl Protein Viewer:ENSP00000368091.5Re-query CCDS DB by Nucleotide ID:ENST00000378814Re-query CCDS DB by Protein ID:ENSP00000368091
Original member Current member NCBI NM_001105568.4 NP_001099038.1 Accepted alive Link to Nucleotide Sequence:NM_001105568.4Link to Protein Sequence:NP_001099038.1Re-query CCDS DB by Nucleotide ID:NM_001105568Re-query CCDS DB by Protein ID:NP_001099038Link to BLAST:NP_001099038.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099038.1 1749 Q9H1H9-3 1749 100% 0 0

Chromosomal Locations for CCDS 47380.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 17760857 17760877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17764155 17764946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17771908 17772059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17773478 17773583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17775015 17775062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17777277 17777354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17778947 17779099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17779592 17779684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17780730 17780906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17781177 17781301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17783646 17783701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17785515 17785641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17787776 17787875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17794249 17794395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17794572 17794704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17796669 17796820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17799266 17799439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17799952 17800113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17804361 17804510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17805475 17805615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17808768 17808930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17817020 17817233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17825768 17825934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17826038 17826124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17828240 17828370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17831101 17831235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17833961 17834071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17836878 17837090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17837472 17837583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17849377 17849489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17850323 17850457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17851955 17852042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17855437 17855617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17856030 17856122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17873377 17873437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17898168 17898180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17987054 17987144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 17987409 17987463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5250 nt):
ATGTCGGATACCAAGGTAAAAGTTGCCGTCCGGGTCCGGCCCATGAACCGACGAGAACTGGAACTGAACA
CCAAGTGCGTGGTGGAGATGGAAGGGAATCAAACGGTCCTGCACCCTCCTCCTTCTAACACCAAACAGGG
AGAAAGGAAACCTCCCAAGGTATTTGCCTTTGATTATTGCTTTTGGTCCATGGATGAATCTAACACTACA
AAATACGCTGGTCAAGAAGTGGTTTTCAAGTGCCTTGGGGAAGGAATTCTTGAAAAAGCCTTTCAGGGGT
ATAATGCGTGTATTTTTGCATATGGACAGACAGGTTCGGGAAAATCCTTTTCCATGATGGGCCATGCTGA
GCAGCTGGGCCTTATTCCAAGGCTCTGCTGTGCTTTATTTAAAAGGATCTCTTTGGAGCAAAATGAGTCA
CAGACCTTTAAAGTTGAAGTGTCCTATATGGAAATTTATAATGAGAAAGTTCGGGATCTTTTAGACCCCA
AAGGGAGTAGACAGTCTCTTAAAGTTCGAGAACATAAAGTTTTGGGACCATATGTAGATGGTTTATCTCA
ACTAGCTGTCACTAGTTTTGAGGATATTGAGTCATTGATGTCTGAGGGAAATAAGTCTCGAACGGTAGCT
GCTACCAACATGAACGAAGAAAGCAGCCGCTCCCATGCTGTGTTCAACATCATAATCACACAGACACTTT
ATGACCTGCAGTCTGGGAATTCCGGGGAGAAAGTCAGTAAGGTCAGCTTGGTAGACCTGGCGGGTAGCGA
AAGAGTATCTAAAACAGGAGCTGCAGGAGAGCGACTGAAAGAAGGCAGCAACATTAACAAATCGCTTACA
ACCTTGGGGTTGGTTATATCATCACTGGCTGACCAGGCAGCTGGCAAGGGTAAAAGCAAATTTGTGCCTT
ATCGAGATTCAGTCCTCACTTGGCTGCTTAAGGACAACTTGGGGGGCAACAGCCAAACCTCTATGATAGC
CACAATCAGCCCAGCCGCAGACAACTATGAAGAGACCCTCTCCACATTAAGATATGCAGACCGAGCCAAA
AGGATTGTGAACCATGCTGTTGTGAATGAGGACCCCAACGCAAAAGTGATCCGAGAACTGCGGGAGGAAG
TCGAGAAACTGAGAGAGCAGCTCTCTCAGGCAGAGGCCATGAAGGCCCCTGAACTGAAGGAGAAGCTCGA
AGAGTCTGAAAAGCTGATAAAAGAACTAACAGTGACTTGGGAAGAGAAGCTGAGAAAAACAGAAGAGATA
GCACAGGAAAGACAACGACAACTTGAAAGCATGGGGATTTCCCTGGAGATGTCCGGTATCAAGGTGGGGG
ATGACAAATGCTACTTAGTCAATCTGAATGCAGACCCTGCTCTTAACGAACTTCTGGTTTATTATTTAAA
GGATCACACCAGGGTGGGTGCAGATACCTCTCAAGATATCCAGCTTTTTGGCATAGGAATTCAGCCTCAG
CACTGTGAGATTGACATTGCATCTGATGGAGACGTCACTCTCACTCCAAAAGAAAATGCAAGGTCCTGTG
TGAACGGCACCCTTGTGTGCAGTACCACCCAGCTGTGGCATGGTGACCGAATCCTATGGGGAAATAATCA
CTTTTTTAGAATAAACTTACCTAAGAGGAAACGTCGAGATTGGTTGAAAGACTTTGAAAAAGAAACGGGC
CCGCCAGAGCATGACCTGGATGCAGCCAGTGAGGCTTCCTCTGAACCAGACTATAACTATGAATTTGCAC
AGATGGAAGTTATCATGAAAACCCTGAATAGTAATGACCCAGTTCAAAATGTGGTTCAGGTCCTGGAGAA
ACAATACCTAGAAGAAAAGAGAAGTGCCCTAGAGGAGCAGCGGCTCATGTATGAGCGGGAACTGGAGCAA
CTCCGCCAGCAGCTCTCCCCCGACAGGCAGCCACAGAGTAGCGGCCCTGACCGCCTGGCCTACAGCAGCC
AGACAGCGCAGCAGAAGGTGACCCAGTGGGCAGAAGAGAGGGATGAACTCTTCCGACAAAGCCTGGCAAA
ACTGCGAGAGCAGCTGGTTAAAGCTAATACCTTGGTGAGGGAAGCAAACTTCCTGGCTGAGGAAATGAGC
AAACTCACCGATTACCAAGTGACTCTTCAGATCCCTGCTGCAAACCTCAGTGCCAATAGGAAGAGAGGTG
CAATAGTGAGTGAACCAGCTATCCAAGTGAGGAGGAAAGGAAAGAGCACCCAAGTGTGGACCATTGAGAA
GCTGGAGAATAAATTAATTGACATGAGAGACCTTTACCAAGAATGGAAGGAAAAAGTTCCTGAGGCAAAG
AGACTCTACGGAAAACGAGGTGACCCTTTCTATGAAGCCCAAGAAAATCACAACCTCATCGGGGTGGCGA
ATGTATTCTTGGAATGCCTCTTCTGTGATGTGAAACTTCAGTATGCAGTCCCTATCATCAGCCAGCAGGG
GGAGGTTGCAGGGCGTCTCCACGTGGAAGTGATGCGTGTTACAGGAGCTGTTCCAGAGCGTGTGGTGGAG
GATGACTCTTCGGAGAATTCCAGTGAAAGTGGGAGCCTTGAAGTCGTAGACAGCAGCGGGGAAATCATTC
ACCGAGTCAAAAAGCTGACATGTCGGGTAAAAATTAAAGAAGCAACGGGGCTGCCCTTAAACCTCTCAAA
TTTTGTCTTCTGTCAATACACATTCTGGGACCAGTGTGAGTCTACGGTGGCTGCCCCGGTGGTGGACCCC
GAGGTGCCTTCACCACAGTCCAAGGATGCCCAGTACACAGTGACCTTCTCCCACTGTAAGGACTATGTGG
TGAATGTAACAGAAGAATTTCTGGAGTTCATTTCAGATGGAGCACTGGCCATTGAAGTATGGGGCCACCG
GTGTGCTGGAAATGGCAGCTCCATCTGGGAGGTCGATTCTCTTCATGCTAAGACAAGAACACTGCATGAC
AGGTGGAATGAAGTAACGCGAAGAATAGAAATGTGGATCTCCATATTAGAATTGAATGAGTTAGGAGAGT
ATGCTGCAGTGGAACTTCATCAGGCAAAAGATGTCAACACAGGAGGCATCTTTCAACTTAGACAGGGTCA
TTCCCGTAGAGTACAAGTCACGGTGAAACCTGTGCAGCATTCAGGGACACTGCCACTTATGGTTGAAGCC
ATCCTGTCAGTATCCATCGGCTGTGTAACTGCCAGGTCCACCAAACTCCAAAGAGGGCTGGACAGTTACC
AGGAAGAAGACTTAAACTGCGTAAGGGAGAGGTGGTCAGATGCACTCATTAAACGACGAGAATACCTGGA
TGAACAGATAAAAAAAGTCAGCAATAAAACAGAGAAAACAGAGGACGATGTGGAGCGGGAAGCCCAGCTT
GTGGAGCAGTGGGTAGGGCTGACTGAGGAAAGGAATGCTGTGCTGGTGCCAGCCCCAGGCAGTGGGATTC
CTGGGGCACCTGCCGACTGGATCCCACCTCCTGGAATGGAAACCCACATACCAGTTCTCTTCCTCGATTT
GAATGCGGATGACCTCAGTGCCAATGAGCAGCTTGTTGGCCCCCATGCATCCGGCGTGAACTCCATCCTG
CCCAAGGAGCATGGCAGCCAGTTTTTCTACCTGCCCATCATAAAGCACAGTGATGATGAGGTTTCAGCCA
CAGCCTCTTGGGATTCCTCGGTGCATGATTCTGTTCACTTGAATAGGGTCACACCACAGAATGAAAGGAT
TTACCTAATTGTGAAAACCACAGTTCAACTCAGCCACCCTGCTGCTATGGAGTTAGTATTACGAAAACGA
ATTGCAGCCAATATTTACAACAAACAGAGTTTCACGCAGAGTTTGAAGAGGAGAATATCCCTGAAAAATA
TATTTTATTCCTGTGGTGTAACCTATGAAATAGTATCCAATATACCAAAGGCAACTGAGGAGATAGAGGA
CCGGGAAACGCTGGCTCTCCTGGCAGCAAGGAGTGAAAACGAAGGCACATCAGATGGGGAGACGTACATT
GAGAAGTACACTCGAGGCGTGCTGCAGGTGGAAAACATTCTGAGTCTTGAACGGCTCCGGCAGGCCGTCA
CAGTCAAAGAAGCACTTTCCACCAAAGCCCGGCACATTCGGAGGAGCCTCAGTACACCAAATGTTCATAA
TGTCTCTTCCAGCCGACCGGACCTTTCTGGCTTTGATGAAGATGACAAGGGTTGGCCAGAGAACCAGTTG
GACATGTCTGACTATAGCTCCAGTTACCAAGATGTAGCATGTTATGGAACTTTACCCAGGGATTCTCCTC
GAAGGAATAAAGAAGGTTGTACATCAGAGACTCCTCATGCCTTAACCGTCAGCCCTTTTAAAGCATTCTC
TCCTCAGCCACCAAAGTTTTTCAAGCCCCTAATGCCTGTAAAAGAGGAGCATAAGAAAAGGATAGCCCTG
GAAGCAAGGCCTCTTCTAAGCCAGGAGGACTCTGAGGAGGAAGAAAATGAGCTGGAAGCTATTAACAGGA
AGCTAATAAGTTCACAGCCTTATGTACCTGTGGAGTTTGCTGACTTCAGTGTTTACAATGCCAGCTTGGA
GAACAGGGAATGGTTTTCCTCTAAAGTAGATCTGTCAAACTCACGGGTCTTGGAGAAAGAAGTGTCCCGT
AGCCCTACCACCAGCAGTATTACCAGTGGCTACTTTTCCCACAGTGCCTCCAATGCCACCCTGTCTGACA
TGGTGGTCCCTTCTAGTGACAGCTCAGACCAGCTGGCCATTCAGACGAAGGATGCAGACTCCACCGAGCA
CTCCACACCATCGCTTGTGCATGATTTCAGGCCGTCCTCAAACAAAGAGTTGACAGAAGTCGAAAAAGGC
TTGGTAAAGGACAAGATAATTGTGGTGCCACTCAAGGAAAACAGTGCCTTAGCCAAAGGGAGCCCATCAT
CCCAGAGCATCCCTGAGAAAAACTCCAAATCACTGTGCAGGACTGGCTCATGTTCAGAACTAGATGCCTG
CCCCAGCAAAATTAGCCAGCCAGCCAGGGGATTCTGCCCCAGGGAGGTGACGGTAGAACACACCACCAAC
ATCCTTGAAGACCATTCTTTCACAGAATTTATGGGAGTGTCAGAGGGAAAAGATTTTGATGGTTTGACAG
ATTCTTCTGCTGGAGAGCTTTCCAGTAGGAGGAGTCTACCAAATAAAACAGGCGGCAAGACTGTCTCCGA
TGGGCTCCACCACCCCAGCCAGCTGCATTCCAAGTTAGAGAATGACCAGGGAGGCACAACCTCACGGTGA

Translation (1749 aa):
MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMDESNTT
KYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCALFKRISLEQNES
QTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFEDIESLMSEGNKSRTVA
ATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLT
TLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAK
RIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELTVTWEEKLRKTEEI
AQERQRQLESMGISLEMSGIKVGDDKCYLVNLNADPALNELLVYYLKDHTRVGADTSQDIQLFGIGIQPQ
HCEIDIASDGDVTLTPKENARSCVNGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFEKETG
PPEHDLDAASEASSEPDYNYEFAQMEVIMKTLNSNDPVQNVVQVLEKQYLEEKRSALEEQRLMYERELEQ
LRQQLSPDRQPQSSGPDRLAYSSQTAQQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMS
KLTDYQVTLQIPAANLSANRKRGAIVSEPAIQVRRKGKSTQVWTIEKLENKLIDMRDLYQEWKEKVPEAK
RLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVMRVTGAVPERVVE
DDSSENSSESGSLEVVDSSGEIIHRVKKLTCRVKIKEATGLPLNLSNFVFCQYTFWDQCESTVAAPVVDP
EVPSPQSKDAQYTVTFSHCKDYVVNVTEEFLEFISDGALAIEVWGHRCAGNGSSIWEVDSLHAKTRTLHD
RWNEVTRRIEMWISILELNELGEYAAVELHQAKDVNTGGIFQLRQGHSRRVQVTVKPVQHSGTLPLMVEA
ILSVSIGCVTARSTKLQRGLDSYQEEDLNCVRERWSDALIKRREYLDEQIKKVSNKTEKTEDDVEREAQL
VEQWVGLTEERNAVLVPAPGSGIPGAPADWIPPPGMETHIPVLFLDLNADDLSANEQLVGPHASGVNSIL
PKEHGSQFFYLPIIKHSDDEVSATASWDSSVHDSVHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKR
IAANIYNKQSFTQSLKRRISLKNIFYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTSDGETYI
EKYTRGVLQVENILSLERLRQAVTVKEALSTKARHIRRSLSTPNVHNVSSSRPDLSGFDEDDKGWPENQL
DMSDYSSSYQDVACYGTLPRDSPRRNKEGCTSETPHALTVSPFKAFSPQPPKFFKPLMPVKEEHKKRIAL
EARPLLSQEDSEEEENELEAINRKLISSQPYVPVEFADFSVYNASLENREWFSSKVDLSNSRVLEKEVSR
SPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLAIQTKDADSTEHSTPSLVHDFRPSSNKELTEVEKG
LVKDKIIVVPLKENSALAKGSPSSQSIPEKNSKSLCRTGSCSELDACPSKISQPARGFCPREVTVEHTTN
ILEDHSFTEFMGVSEGKDFDGLTDSSAGELSSRRSLPNKTGGKTVSDGLHHPSQLHSKLENDQGGTTSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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