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Report for CCDS47455.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
47455.1 |
Public |
Homo sapiens |
6 |
SNAP91 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9892](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:47455.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:9892](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 6 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 47455.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000369694.7 |
ENSP00000358708.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000369694.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000358708.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000369694](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000358708](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000439399.6 |
ENSP00000400459.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000439399.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000400459.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000439399](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000400459](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000521743.5 |
ENSP00000428215.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000521743.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000428215.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000521743](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000428215](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001242792.2 |
NP_001229721.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001242792.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001229721.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001242792](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001229721](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001229721.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014841.3 |
NP_055656.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014841.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055656.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014841](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055656](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055656.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 47455.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2724 nt): ATGTCGGGCCAAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTTACAGGCTCTGCTGTAGCAA GAGCGGTCTGCAAAGCCACTACTCATGAAGTAATGGGCCCCAAGAAAAAGCACCTGGACTATTTGATCCA GGCTACCAACGAGACCAATGTTAATATTCCTCAGATGGCCGACACTCTCTTTGAGCGGGCAACAAACAGT AGCTGGGTGGTTGTGTTTAAGGCTTTAGTGACAACACATCATCTCATGGTGCATGGAAATGAGAGATTTA TTCAATATTTGGCTTCTAGAAATACACTATTCAATCTCAGCAATTTTTTGGACAAAAGTGGATCCCATGG TTATGATATGTCTACCTTCATAAGGCGCTATAGTAGATATTTGAATGAAAAGGCTTTTTCTTACAGACAG ATGGCCTTTGATTTTGCCAGGGTGAAGAAAGGGGCCGATGGTGTAATGAGGACAATGGCTCCCGAAAAGC TGCTAAAGAGTATGCCAATACTACAGGGACAAATTGATGCACTGCTTGAATTTGATGTGCATCCAAATGA ACTAACAAATGGTGTCATAAATGCAGCATTTATGCTTCTTTTCAAAGATCTTATCAAACTTTTTGCTTGC TACAATGATGGTGTTATTAACTTACTCGAAAAGTTTTTTGAAATGAAGAAAGGACAATGTAAAGATGCTC TAGAAATTTACAAACGATTTCTAACTAGAATGACACGAGTGTCTGAATTTCTCAAGGTTGCAGAGCAAGT TGGTATTGATAAAGGTGACATTCCTGACCTCACACAGGCTCCCAGCAGTCTTATGGAGACGCTTGAACAG CATCTAAATACATTAGAAGGAAAGAAACCTGGAAACAATGAAGGATCTGGTGCTCCCTCTCCATTAAGTA AGTCTTCTCCAGCCACAACTGTTACGTCTCCTAATTCTACACCAGCTAAAACTATTGACACATCCCCACC GGTTGATTTATTTGCAACTGCATCTGCGGCTGTCCCAGTCAGCACTTCTAAACCATCTAGTGATCTCCTG GACCTCCAGCCAGACTTTTCCTCTGGAGGGGCAGCAGCAGCCGCAGCACCAGCACCACCACCACCTGCTG GAGGAGCCACTGCATGGGGAGACCTTTTGGGAGAGGATTCTTTGGCTGCACTTTCCTCTGTTCCCTCTGA AGCACAGATTTCAGATCCATTTGCACCAGAACCTACCCCTCCTACTACAACTGCTGAAATTGCAACTGCC TCAGCTTCTGCCTCCACTACTACAACTGTTACTGCTGTCACTGCTGAAGTGGATCTCTTTGGAGATGCCT TTGCAGCTTCTCCTGGGGAGGCCCCTGCAGCATCCGAAGGGGCCGCCGCACCAGCTACCCCAACCCCTGT AGCAGCAGCACTTGATGCATGTTCAGGAAATGACCCCTTTGCCCCGTCTGAAGGTAGTGCAGAGGCTGCA CCTGAGCTGGACCTCTTTGCAATGAAGCCACCTGAGACCAGTGTTCCTGTAGTTACCCCTACAGCTAGCA CAGCCCCTCCAGTTCCCGCAACTGCTCCTTCTCCTGCTCCTGCCGTTGCAGCTGCTGCTGCTGCCACTAC TGCTGCCACCGCCGCTGCCACCACCACTACCACCACCTCCGCTGCCACCGCCACCACTGCTCCTCCTGCT CTAGATATCTTTGGTGATTTATTTGAGTCCACTCCTGAAGTTGCTGCAGCGCCTAAGCCAGATGCTGCTC CTAGCATAGACCTGTTTAGTACAGATGCTTTCTCCTCTCCACCACAAGGGGCCTCTCCTGTGCCTGAGAG TTCTCTCACTGCTGACCTCTTATCTGTGGATGCATTTGCAGCACCATCTCCTGCAACCACTGCCTCGCCA GCAAAGGTGGATTCTTCAGGTGTCATAGACCTTTTTGGGGATGCATTTGGAAGTAGTGCTTCTGAACCCC AACCTGCATCTCAGGCTGCTTCTAGTTCATCAGCATCGGCAGACCTACTAGCTGGATTTGGGGGTTCTTT CATGGCGCCTTCCCCATCTCCAGTGACTCCAGCTCAGAATAACCTGCTACAGCCCAATTTTGAGGCAGCT TTTGGGACAACGCCTTCAACTTCCAGCAGCAGCTCCTTTGATCCATCAGTGTTTGATGGTCTAGGTGATC TTTTGATGCCAACCATGGCACCAGCTGGGCAGCCTGCACCTGTCTCAATGGTACCACCCAGTCCTGCAAT GGCAGCCAGCAAAGCCCTTGGAAGTGATCTTGATTCATCTCTTGCCAGCTTAGTAGGCAATCTTGGAATT TCTGGTACCACAACAAAAAAGGGAGATCTTCAGTGGAATGCTGGAGAGAAAAAGTTGACTGGTGGAGCCA ACTGGCAGCCTAAAGTAGCTCCAGCAACCTGGTCAGCAGGCGTTCCACCAAGTGCACCTTTGCAAGGAGC TGTACCTCCAACCAGTTCAGTTCCTCCTGTTGCCGGGGCCCCATCGGTTGGACAACCTGGAGCAGGATTT GGAATGCCTCCTGCTGGGACAGGCATGCCCATGATGCCTCAGCAGCCGGTCATGTTTGCACAGCCCATGA TGAGGCCCCCCTTTGGAGCTGCCGCTGTACCTGGCACGCAGCTTTCTCCAAGCCCTACACCTGCCAGTCA GAGTCCCAAGAAACCTCCAGCAAAGGACCCATTAGCGGATCTTAACATCAAGGATTTCTTGTAA
Translation (907 aa): MSGQTLTDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNS SWVVVFKALVTTHHLMVHGNERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYRQ MAFDFARVKKGADGVMRTMAPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFAC YNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLEQ HLNTLEGKKPGNNEGSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDLFATASAAVPVSTSKPSSDLL DLQPDFSSGGAAAAAAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATA SASASTTTTVTAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAA PELDLFAMKPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAPPA LDIFGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSVDAFAAPSPATTASP AKVDSSGVIDLFGDAFGSSASEPQPASQAASSSSASADLLAGFGGSFMAPSPSPVTPAQNNLLQPNFEAA FGTTPSTSSSSSFDPSVFDGLGDLLMPTMAPAGQPAPVSMVPPSPAMAASKALGSDLDSSLASLVGNLGI SGTTTKKGDLQWNAGEKKLTGGANWQPKVAPATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGF GMPPAGTGMPMMPQQPVMFAQPMMRPPFGAAAVPGTQLSPSPTPASQSPKKPPAKDPLADLNIKDFL
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