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Report for CCDS47485.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47485.1 Public Homo sapiens 6 BCLAF1 24 110 108 CCDS HistoryNCBI Gene:9774Re-query CCDS DB by CCDS ID:47485.1Re-query CCDS DB by GeneID:9774See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47485.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530767.5 ENSP00000436501.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530767.5Link to Ensembl Protein Viewer:ENSP00000436501.1Re-query CCDS DB by Nucleotide ID:ENST00000530767Re-query CCDS DB by Protein ID:ENSP00000436501
Original member Current member NCBI NM_001077441.3 NP_001070909.1 Accepted alive Link to Nucleotide Sequence:NM_001077441.3Link to Protein Sequence:NP_001070909.1Re-query CCDS DB by Nucleotide ID:NM_001077441Re-query CCDS DB by Protein ID:NP_001070909Link to BLAST:NP_001070909.1
Original member Current member NCBI NM_001386702.1 NP_001373631.1 Accepted alive Link to Nucleotide Sequence:NM_001386702.1Link to Protein Sequence:NP_001373631.1Re-query CCDS DB by Nucleotide ID:NM_001386702Re-query CCDS DB by Protein ID:NP_001373631Link to BLAST:NP_001373631.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070909.1 747 Q9NYF8-4 747 100% 0 0
NP_001373631.1 747 Q9NYF8-4 747 100% 0 0

Chromosomal Locations for CCDS 47485.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 136261110 136261115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136261265 136261477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136267029 136267175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136268162 136268339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136269437 136269612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136271995 136272079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136273082 136273187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136275532 136275701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136275843 136275989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136277865 136278776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136279763 136279866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2244 nt):
ATGGGTCGCTCCAATTCTAGATCACATTCTTCAAGGTCAAAGTCTAGATCACAGTCTAGTTCTCGATCAA
GATCAAGATCTCATTCTAGAAAGAAGCGATACAGTTCTAGGTCTCGTTCCAGAACATATTCAAGGTCTCG
TAGTAGAGATCGTATGTATTCTAGAGATTATCGTCGCGATTACAGAAATAATAGAGGAATGAGACGACCT
TATGGGTACAGAGGAAGGGGTAGAGGGTATTATCAAGGAGGAGGAGGTAGATATCATCGAGGTGGTTATA
GACCTGTCTGGAATAGAAGGCACTCTAGGAGTCCTAGACGAGGTCGTTCACGTTCCAGGAGTCCAAAAAG
AAGATCCGTTTCTTCTCAAAGATCCAGAAGCAGATCTCGCCGGTCATATAGATCTTCTAGGTCTCCAAGA
TCATCCTCTTCTCGTTCTTCATCCCCATATAGCAAATCTCCTGTTTCTAAAAGACGAGGGTCTCAGGAAA
AACAAACCAAAAAAGCTGAAGGGGAACCCCAAGAAGAGAGTCCGTTGAAAAGTAAATCACAGGAGGAACC
GAAAGATACATTTGAACATGACCCATCTGAGTCTATCGATGAATTTAATAAGTCATCAGCCACATCCGGT
GATATTTGGCCTGGCCTTTCAGCTTATGATAATAGTCCTAGATCACCCCATAGTCCTTCACCTATTGCTA
CACCACCTAGTCAGAGTTCATCTTGCTCTGATGCTCCCATGCTCAGTACAGTTCACTCTGCAAAAAATAC
TCCTTCTCAGCATTCACATTCCATTCAGCATAGTCCTGAAAGGTCTGGGTCTGGTTCTGTTGGAAATGGA
TCTAGTCGATACAGTCCTTCTCAGAATAGTCCAATTCATCACATCCCTTCACGAAGAAGTCCTGCAAAGA
CAATCGCACCACAGAATGCTCCAAGAGATGAGTCTAGGGGCCGTTCCTCGTTTTATCCTGATGGTGGAGA
TCAGGAAACTGCAAAGACTGGGAAGTTCTTAAAAAGTCCCCCTCTACACAAGAATCTGGATGCACGAGAA
AAGTCTACCTTCAGAGAGGAAAGCCCACTTAGGATCAAAATGATAGCGAGTGATTCTCACCGTCCTGAAG
TCAAACTCAAAATGGCACCTGTTCCTCTTGATGATTCTAACAGACCTGCTTCCTTGACTAAAGACAGGCT
GCTTGCTAGTACACTTGTCCATTCTGTCAAGAAGGAGCAAGAATTCCGATCCATCTTTGACCACATTAAG
TTGCCACAGGCCAGCAAAAGCACTTCAGAGTCATTTATTCAACACATTGTGTCCTTGGTTCATCATGTTA
AAGAGCAATACTTCAAGTCAGCTGCAATGACCCTAAACGAGCGGTTCACTTCGTATCAGAAAGCCACTGA
AGAACATAGTACTCGGCAAAAGAGCCCTGAAATACACAGGAGAATTGACATCTCACCAAGTACCCTGAGG
AAGCATACCCGTTTAGCAGGGGAAGAGAGAGTTTTTAAAGAAGAAAATCAAAAGGGAGATAAAAAATTAA
GGTGTGACTCTGCTGACCTTCGGCATGACATTGATCGCCGTAGAAAAGAAAGAAGTAAAGAACGGGGAGA
TTCCAAGGGCTCCAGGGAATCCAGTGGATCAAGAAAGCAGGAAAAAACTCCAAAAGATTACAAGGAATAC
AAATCTTACAAAGATGACAGTAAACATAAAAGAGAGCAAGATCATTCTCGATCTTCATCCTCTTCAGCAT
CACCTTCTTCTCCCAGTTCTCGAGAAGAAAAGGAGAGTAAGAAGGAAAGAGAAGAAGAATTTAAAACTCA
CCATGAAATGAAAGAATACTCAGGCTTTGCAGGAGTTAGCCGACCACGAGGAACCTTTTTTCGAATTAGA
GGCAGAGGAAGAGCCAGAGGAGTTTTTGCTGGGACAAATACTGGTCCAAACAACTCAAATACTACTTTTC
AAAAGAGACCGAAGGAAGAGGAATGGGATCCAGAATATACCCCAAAGAGCAAGAAGTACTTCTTGCATGA
CGACAGAGATGATGGTGTGGATTATTGGGCCAAAAGAGGAAGAGGTCGTGGTACTTTTCAACGTGGCAGA
GGGCGCTTTAACTTCAAAAAATCAGGTAGCAGTCCTAAATGGACTCATGACAAATACCAAGGGGATGGGA
TTGTTGAAGATGAAGAAGAGACCATGGAAAATAATGAAGAAAAGAAGGACAGACGCAAGGAAGAAAAGGA
ATAA

Translation (747 aa):
MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDRMYSRDYRRDYRNNRGMRRP
YGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPR
SSSSRSSSPYSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPKDTFEHDPSESIDEFNKSSATSG
DIWPGLSAYDNSPRSPHSPSPIATPPSQSSSCSDAPMLSTVHSAKNTPSQHSHSIQHSPERSGSGSVGNG
SSRYSPSQNSPIHHIPSRRSPAKTIAPQNAPRDESRGRSSFYPDGGDQETAKTGKFLKSPPLHKNLDARE
KSTFREESPLRIKMIASDSHRPEVKLKMAPVPLDDSNRPASLTKDRLLASTLVHSVKKEQEFRSIFDHIK
LPQASKSTSESFIQHIVSLVHHVKEQYFKSAAMTLNERFTSYQKATEEHSTRQKSPEIHRRIDISPSTLR
KHTRLAGEERVFKEENQKGDKKLRCDSADLRHDIDRRRKERSKERGDSKGSRESSGSRKQEKTPKDYKEY
KSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFKTHHEMKEYSGFAGVSRPRGTFFRIR
GRGRARGVFAGTNTGPNNSNTTFQKRPKEEEWDPEYTPKSKKYFLHDDRDDGVDYWAKRGRGRGTFQRGR
GRFNFKKSGSSPKWTHDKYQGDGIVEDEEETMENNEEKKDRRKEEKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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