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Report for CCDS47820.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47820.1 Public Homo sapiens 8 DMTN 24 110 108 CCDS HistoryNCBI Gene:2039Re-query CCDS DB by CCDS ID:47820.1Re-query CCDS DB by GeneID:2039See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47820.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381470.7 ENSP00000370879.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381470.7Link to Ensembl Protein Viewer:ENSP00000370879.3Re-query CCDS DB by Nucleotide ID:ENST00000381470Re-query CCDS DB by Protein ID:ENSP00000370879
Original member Current member EBI ENST00000415253.5 ENSP00000401291.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000415253.5Link to Ensembl Protein Viewer:ENSP00000401291.1Re-query CCDS DB by Nucleotide ID:ENST00000415253Re-query CCDS DB by Protein ID:ENSP00000401291
Original member Current member EBI ENST00000519907.5 ENSP00000429377.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519907.5Link to Ensembl Protein Viewer:ENSP00000429377.1Re-query CCDS DB by Nucleotide ID:ENST00000519907Re-query CCDS DB by Protein ID:ENSP00000429377
Original member Current member NCBI NM_001114137.4 NP_001107609.1 Accepted alive Link to Nucleotide Sequence:NM_001114137.4Link to Protein Sequence:NP_001107609.1Re-query CCDS DB by Nucleotide ID:NM_001114137Re-query CCDS DB by Protein ID:NP_001107609Link to BLAST:NP_001107609.1
Original member Current member NCBI NM_001114138.3 NP_001107610.1 Accepted alive Link to Nucleotide Sequence:NM_001114138.3Link to Protein Sequence:NP_001107610.1Re-query CCDS DB by Nucleotide ID:NM_001114138Re-query CCDS DB by Protein ID:NP_001107610Link to BLAST:NP_001107610.1
Original member Current member NCBI NM_001302816.3 NP_001289745.1 Accepted alive Link to Nucleotide Sequence:NM_001302816.3Link to Protein Sequence:NP_001289745.1Re-query CCDS DB by Nucleotide ID:NM_001302816Re-query CCDS DB by Protein ID:NP_001289745Link to BLAST:NP_001289745.1
Original member Current member NCBI NM_001323383.2 NP_001310312.1 Accepted alive Link to Nucleotide Sequence:NM_001323383.2Link to Protein Sequence:NP_001310312.1Re-query CCDS DB by Nucleotide ID:NM_001323383Re-query CCDS DB by Protein ID:NP_001310312Link to BLAST:NP_001310312.1
Original member Current member NCBI NM_001323384.2 NP_001310313.1 Accepted alive Link to Nucleotide Sequence:NM_001323384.2Link to Protein Sequence:NP_001310313.1Re-query CCDS DB by Nucleotide ID:NM_001323384Re-query CCDS DB by Protein ID:NP_001310313Link to BLAST:NP_001310313.1
Original member Current member NCBI NM_001323385.2 NP_001310314.1 Accepted alive Link to Nucleotide Sequence:NM_001323385.2Link to Protein Sequence:NP_001310314.1Re-query CCDS DB by Nucleotide ID:NM_001323385Re-query CCDS DB by Protein ID:NP_001310314Link to BLAST:NP_001310314.1
Original member Current member NCBI NM_001387726.1 NP_001374655.1 Accepted alive Link to Nucleotide Sequence:NM_001387726.1Link to Protein Sequence:NP_001374655.1Re-query CCDS DB by Nucleotide ID:NM_001387726Re-query CCDS DB by Protein ID:NP_001374655Link to BLAST:NP_001374655.1
Original member Current member NCBI NM_001387728.1 NP_001374657.1 Accepted alive Link to Nucleotide Sequence:NM_001387728.1Link to Protein Sequence:NP_001374657.1Re-query CCDS DB by Nucleotide ID:NM_001387728Re-query CCDS DB by Protein ID:NP_001374657Link to BLAST:NP_001374657.1
Original member Current member NCBI NM_001387734.1 NP_001374663.1 Accepted alive Link to Nucleotide Sequence:NM_001387734.1Link to Protein Sequence:NP_001374663.1Re-query CCDS DB by Nucleotide ID:NM_001387734Re-query CCDS DB by Protein ID:NP_001374663Link to BLAST:NP_001374663.1
Original member Current member NCBI NM_001387742.1 NP_001374671.1 Accepted alive Link to Nucleotide Sequence:NM_001387742.1Link to Protein Sequence:NP_001374671.1Re-query CCDS DB by Nucleotide ID:NM_001387742Re-query CCDS DB by Protein ID:NP_001374671Link to BLAST:NP_001374671.1
Original member Current member NCBI NM_001387755.1 NP_001374684.1 Accepted alive Link to Nucleotide Sequence:NM_001387755.1Link to Protein Sequence:NP_001374684.1Re-query CCDS DB by Nucleotide ID:NM_001387755Re-query CCDS DB by Protein ID:NP_001374684Link to BLAST:NP_001374684.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107609.1 383 Q08495-2 383 100% 0 0
NP_001107610.1 383 Q08495-2 383 100% 0 0
NP_001289745.1 383 Q08495-2 383 100% 0 0
NP_001310312.1 383 Q08495-2 383 100% 0 0
NP_001310313.1 383 Q08495-2 383 100% 0 0
NP_001310314.1 383 Q08495-2 383 100% 0 0
NP_001374655.1 383 Q08495-2 383 100% 0 0
NP_001374657.1 383 Q08495-2 383 100% 0 0
NP_001374663.1 383 Q08495-2 383 100% 0 0
NP_001374671.1 383 Q08495-2 383 100% 0 0
NP_001374684.1 383 Q08495-2 383 100% 0 0

Chromosomal Locations for CCDS 47820.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22066876 22066893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22067085 22067159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22067527 22067682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069016 22069060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069419 22069518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22069881 22069937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22070182 22070334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22072326 22072450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22073730 22073835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080180 22080244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080412 22080460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22080618 22080625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22081113 22081193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22081350 22081463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGGAACGGCTGCAGAAGCAACCACTTACCTCCCCCGGGAGCGTGAGCCCCTCCCGAGATTCCAGTGTGC
CTGGCTCTCCCTCCAGCATCGTGGCCAAGATGGACAATCAGGTGCTGGGCTACAAGGACCTGGCTGCCAT
CCCCAAGGACAAGGCCATCCTGGACATCGAGCGGCCCGACCTCATGATCTACGAGCCTCACTTCACTTAT
TCCCTCCTGGAACACGTGGAGCTGCCTCGCAGCCGCGAGCGCTCGCTGTCACCCAAATCCACATCCCCCC
CACCATCCCCAGAGGTGTGGGCGGACAGCCGGTCGCCTGGAATCATCTCTCAGGCCTCGGCCCCCAGAAC
CACTGGAACCCCCCGGACCAGCCTGCCCCATTTCCACCACCCTGAGACCTCCCGCCCAGATTCCAACATC
TACAAGAAGCCTCCCATCTATAAGCAGAGAGAGTCCGTGGGAGGCAGCCCTCAGACCAAGCACCTCATCG
AGGATCTCATCATCGAGTCATCCAAGTTTCCTGCAGCCCAGCCCCCAGACCCCAACCAGCCAGCCAAAAT
CGAAACCGACTACTGGCCATGCCCCCCGTCTCTGGCTGTTGTGGAGACAGAATGGAGGAAGCGGAAGGCG
TCTCGGAGGGGAGCAGAGGAAGAGGAGGAGGAGGAAGATGACGACTCTGGAGAGGAGATGAAGGCTCTCA
GGGAGCGTCAGAGAGAGGAACTCAGTAAGGTTACTTCCAACTTGGGAAAGATGATCTTGAAAGAAGAGAT
GGAAAAGTCATTGCCGATCCGAAGGAAAACCCGCTCTCTGCCTGACCGGACACCCTTCCATACCTCCTTG
CACCAGGGAACGTCTAAATCTTCCTCTCTCCCCGCCTATGGCAGGACCACCCTGAGCCGGCTACAGTCCA
CAGAGTTCAGCCCATCAGGGAGTGAGACTGGAAGCCCAGGCCTGCAGATCTATCCCTATGAAATGCTAGT
GGTGACCAACAAGGGGCGAACCAAGCTGCCACCGGGGGTGGATCGGATGCGGCTTGAGAGGCATCTGTCT
GCCGAGGACTTCTCAAGGGTATTTGCCATGTCCCCTGAAGAGTTTGGCAAGCTGGCTCTGTGGAAGCGGA
ATGAGCTCAAGAAGAAGGCCTCTCTCTTCTGA

Translation (383 aa):
MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDLAAIPKDKAILDIERPDLMIYEPHFTY
SLLEHVELPRSRERSLSPKSTSPPPSPEVWADSRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNI
YKKPPIYKQRESVGGSPQTKHLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKA
SRRGAEEEEEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPFHTSL
HQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQIYPYEMLVVTNKGRTKLPPGVDRMRLERHLS
AEDFSRVFAMSPEEFGKLALWKRNELKKKASLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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