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Report for CCDS47939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47939.1 Public Homo sapiens 8 MROH1 24 110 108 CCDS HistoryNCBI Gene:727957Re-query CCDS DB by CCDS ID:47939.1Re-query CCDS DB by GeneID:727957See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423230.6 ENSP00000388174.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423230.6Link to Ensembl Protein Viewer:ENSP00000388174.2Re-query CCDS DB by Nucleotide ID:ENST00000423230Re-query CCDS DB by Protein ID:ENSP00000388174
Original member Current member NCBI NM_001099280.3 NP_001092750.2 Accepted alive Link to Nucleotide Sequence:NM_001099280.3Link to Protein Sequence:NP_001092750.2Re-query CCDS DB by Nucleotide ID:NM_001099280Re-query CCDS DB by Protein ID:NP_001092750Link to BLAST:NP_001092750.2
Original member Current member NCBI NM_001099281.3 NP_001092751.2 Accepted alive Link to Nucleotide Sequence:NM_001099281.3Link to Protein Sequence:NP_001092751.2Re-query CCDS DB by Nucleotide ID:NM_001099281Re-query CCDS DB by Protein ID:NP_001092751Link to BLAST:NP_001092751.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092750.2 422 Q8NDA8-4 422 100% 0 0
NP_001092751.2 422 Q8NDA8-4 422 100% 0 0

Chromosomal Locations for CCDS 47939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 144163827 144163848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144168295 144168440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144179455 144179586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144180178 144180340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144180425 144180523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144190784 144190935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144191715 144191855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144192309 144192401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144199122 144199200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144200428 144200541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 144212994 144213121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1269 nt):
ATGACTGAGTCCTCCATGAAGAAGCTGGCCTCCACCCTGCTGGACGCCATCACCGATAAGGACCCCCTGG
TGCAGGAGCAGGTCTGCAGTGCCCTGTGCTCCCTCGGGGAGGCGCGGCCGGTGGAGACGCTCCGTGCCTG
CGAGGAGTATCTGCGGCAGCATGACAAGCTGGCACACCCATACCGAGCAGCGGTCCTGAGGGCCATGGAG
AGGGTCCTGAGCAGTCGCGCCAGTGAGCTGGACAAGGACACAGCCAGCACCATCATCCTCCTGGCCTCCA
GCGAGATGACCAAGACGAAGGACCTGGTCTGGGACTGGCAGCAGGCGGCGAGTGGCGTCCTGGTGGCCGT
GGGAAGACAGTTCATCAGCAAGGTGATGGAGGAGCTGCTGCGCAGGCTGCACCCTGGGACCCTGCCACAC
TGCGCCGTGCTGCACACCCTCGCCAGCCTCTCGGTGGCCAACGCGTTCGGCGTAGTCCCCTTCCTGCCAT
CCGTCCTGAGCTCCCTGCTGCCCGTGCTGGGCGTGGCCAAGCAGGACACGGTGCGCGTGGCCTTCTGCTC
CGCTCTGCAGCGCTTCAGCGAGGGTGCCCTGGAGTACCTAGCCAACCTGGACCGAGCCCCAGACCCCACG
GTCAGGAAGGACGCCTTTGCCACCGACATCTTCAGCGCCTACGATGTTCTCTTCCATCAGTGGCTGCAGA
GTCGAGAAGCCAAGCTCCGTCTTGCCGTGGTGGAGGCTCTGGGGCCTATGAGCCATCTGCTGCCCAGTGA
GAGGCTGGAAGAGCAGCTGCCCAAGCTCCTCCCTGGGATTCTCGCCCTCTACAAGAAGCACGCAGAGACC
TTCTACTTGTCCAAGAGCCTGGGCCAGATCCTCGAGGCAGCTGTGAGTGTGGGCAGCCGCACACTGGAGA
CCCAGCTGGATGCCCTCTTGGCTGCACTGCACTCCCAGATCTGTGTGCCTGTGGAGTCCTCAAGCCCCCT
GGTGATGAGTAACCAGAAGGAGGTGCTGCGCTGCTTCACTGTGCTGGCCTGCAGCTCGCCTGACCGCCTA
CTGGCCTTCCTGCTGCCCAGGCTGGACACCAGCAATGAGAGGACCCGCGTGGGCACCCTGCAGGTGGTCA
GACATGTCATCAACTCAGCTGGCAGCACTAACACCAGAATAACACTGATGTTGCCATCAGCAGTCACACG
ACTGAAACATGAGGACTGCCCTGCACGTGCTGCTCCGCAGCCTGCTGATCTAACGGCCGCGCCCGCGTCT
GTTGCTTGA

Translation (422 aa):
MTESSMKKLASTLLDAITDKDPLVQEQVCSALCSLGEARPVETLRACEEYLRQHDKLAHPYRAAVLRAME
RVLSSRASELDKDTASTIILLASSEMTKTKDLVWDWQQAASGVLVAVGRQFISKVMEELLRRLHPGTLPH
CAVLHTLASLSVANAFGVVPFLPSVLSSLLPVLGVAKQDTVRVAFCSALQRFSEGALEYLANLDRAPDPT
VRKDAFATDIFSAYDVLFHQWLQSREAKLRLAVVEALGPMSHLLPSERLEEQLPKLLPGILALYKKHAET
FYLSKSLGQILEAAVSVGSRTLETQLDALLAALHSQICVPVESSSPLVMSNQKEVLRCFTVLACSSPDRL
LAFLLPRLDTSNERTRVGTLQVVRHVINSAGSTNTRITLMLPSAVTRLKHEDCPARAAPQPADLTAAPAS
VA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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