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Report for CCDS48081.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48081.1 Public Homo sapiens X TCEANC 24 110 108 CCDS HistoryNCBI Gene:170082Re-query CCDS DB by CCDS ID:48081.1Re-query CCDS DB by GeneID:170082See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48081.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544987.3 ENSP00000440038.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544987.3Link to Ensembl Protein Viewer:ENSP00000440038.2Re-query CCDS DB by Nucleotide ID:ENST00000544987Re-query CCDS DB by Protein ID:ENSP00000440038
Original member Current member NCBI NM_152634.4 NP_689847.2 Accepted alive Link to Nucleotide Sequence:NM_152634.4Link to Protein Sequence:NP_689847.2Re-query CCDS DB by Nucleotide ID:NM_152634Re-query CCDS DB by Protein ID:NP_689847Link to BLAST:NP_689847.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689847.2 381 Q8N8B7-2 381 100% 0 0

Chromosomal Locations for CCDS 48081.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 13659687 13659768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 13662501 13663564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGATCTCGGCTCACCGCAAACTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCGGCCTTCCGAGTAG
CTGGGACTACAGCTGTAAAGATGTCTGACAAGAACCAGATAGCTGCCAGAGCTTCTCTTATTGAGCAACT
GATGTCCAAAAGGAATTTTGAGGATCTTGGCAACCACCTTACTGAGCTAGAAACAATTTATGTGACTAAG
GAGCATCTCCAGGAGACAGATGTGGTCAGAGCTGTGTACAGAGTCCTCAAAAACTGCCCCTCTGTGGCTT
TGAAAAAGAAAGCCAAGTGTTTGCTATCAAAGTGGAAAGCTGTTTATAAGCAGACTCACTCCAAAGCGAG
GAACAGCCCTAAATTATTTCCTGTGAGGGGTAATAAAGAAGAAAATTCAGGACCTTCTCATGACCCAAGT
CAGAATGAGACACTGGGCATCTGCAGCTCGAATTCTCTGTCTTCCCAAGACGTTGCAAAACTCAGTGAAA
TGATTGTGCCTGAAAATAGAGCCATTCAATTGAAACCTAAGGAAGAGCATTTTGGGGATGGTGACCCTGA
ATCCACTGGCAAGAGATCGAGTGAGTTGCTGGATCCCACAACACCCATGAGAACTAAATGCATAGAGCTT
CTTTACGCAGCTTTAACTAGTTCTTCCACAGATCAACCCAAAGCTGATTTGTGGCAAAACTTTGCAAGAG
AAATTGAAGAGCATGTTTTTACCCTTTATTCAAAGAACATCAAAAAATATAAAACTTGCATCAGAAGCAA
AGTTGCCAATTTGAAGAACCCCAGAAATTCTCATTTACAACAAAACTTGCTCTCTGGGACCACGTCTCCA
CGAGAATTTGCTGAAATGACTGTCATGGAGATGGCAAATAAGGAACTGAAGCAGTTGAGAGCCTCCTACA
CGGAATCTTGTATCCAGGAACATTACCTTCCCCAAGTAATTGATGGCACACAGACAAATAAAATAAAATG
CAGACGCTGTGAGAAATACAATTGCAAAGTCACTGTAATTGACAGAGGAACACTTTTCCTTCCCAGCTGG
GTGCGGAATTCAAACCCAGATGAACAAATGATGACTTACGTAATTTGTAACGAATGTGGGGAGCAGTGGT
ACCATAGCAAGTGGGTGTGCTGGTAA

Translation (381 aa):
MISAHRKLCLPGSSNSPASAFRVAGTTAVKMSDKNQIAARASLIEQLMSKRNFEDLGNHLTELETIYVTK
EHLQETDVVRAVYRVLKNCPSVALKKKAKCLLSKWKAVYKQTHSKARNSPKLFPVRGNKEENSGPSHDPS
QNETLGICSSNSLSSQDVAKLSEMIVPENRAIQLKPKEEHFGDGDPESTGKRSSELLDPTTPMRTKCIEL
LYAALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSP
REFAEMTVMEMANKELKQLRASYTESCIQEHYLPQVIDGTQTNKIKCRRCEKYNCKVTVIDRGTLFLPSW
VRNSNPDEQMMTYVICNECGEQWYHSKWVCW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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