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Report for CCDS48153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48153.1 Public Homo sapiens X PAK3 24 110 108 CCDS HistoryNCBI Gene:5063Re-query CCDS DB by CCDS ID:48153.1Re-query CCDS DB by GeneID:5063See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262836.6 ENSP00000262836.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262836.6Link to Ensembl Protein Viewer:ENSP00000262836.4Re-query CCDS DB by Nucleotide ID:ENST00000262836Re-query CCDS DB by Protein ID:ENSP00000262836
Original member Current member EBI ENST00000372010.5 ENSP00000361080.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372010.5Link to Ensembl Protein Viewer:ENSP00000361080.1Re-query CCDS DB by Nucleotide ID:ENST00000372010Re-query CCDS DB by Protein ID:ENSP00000361080
Original member Current member NCBI NM_001128173.3 NP_001121645.1 Accepted alive Link to Nucleotide Sequence:NM_001128173.3Link to Protein Sequence:NP_001121645.1Re-query CCDS DB by Nucleotide ID:NM_001128173Re-query CCDS DB by Protein ID:NP_001121645Link to BLAST:NP_001121645.1
Original member Current member NCBI NM_001324327.2 NP_001311256.1 Accepted alive Link to Nucleotide Sequence:NM_001324327.2Link to Protein Sequence:NP_001311256.1Re-query CCDS DB by Nucleotide ID:NM_001324327Re-query CCDS DB by Protein ID:NP_001311256Link to BLAST:NP_001311256.1
Original member Current member NCBI NM_001324328.2 NP_001311257.1 Accepted alive Link to Nucleotide Sequence:NM_001324328.2Link to Protein Sequence:NP_001311257.1Re-query CCDS DB by Nucleotide ID:NM_001324328Re-query CCDS DB by Protein ID:NP_001311257Link to BLAST:NP_001311257.1
Original member Current member NCBI NM_001324329.2 NP_001311258.1 Accepted alive Link to Nucleotide Sequence:NM_001324329.2Link to Protein Sequence:NP_001311258.1Re-query CCDS DB by Nucleotide ID:NM_001324329Re-query CCDS DB by Protein ID:NP_001311258Link to BLAST:NP_001311258.1
Original member Current member NCBI NM_001324333.2 NP_001311262.1 Accepted alive Link to Nucleotide Sequence:NM_001324333.2Link to Protein Sequence:NP_001311262.1Re-query CCDS DB by Nucleotide ID:NM_001324333Re-query CCDS DB by Protein ID:NP_001311262Link to BLAST:NP_001311262.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121645.1 559 O75914-1 559 100% 0 0
NP_001311256.1 559 O75914-1 559 100% 0 0
NP_001311257.1 559 O75914-1 559 100% 0 0
NP_001311258.1 559 O75914-1 559 100% 0 0
NP_001311262.1 559 O75914-1 559 100% 0 0

Chromosomal Locations for CCDS 48153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 111123104 111123278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111142096 111142196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111146521 111146565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111147737 111147890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111152410 111152447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111162915 111163046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111163562 111163727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111173018 111173081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111192127 111192175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111192506 111192618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111194301 111194418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111195842 111195941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111196444 111196640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111216421 111216558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111220358 111220447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1680 nt):
ATGTCTGACGGTCTGGATAATGAAGAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGTAACAACCGGG
AT
TCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAAGAATAAGAAAGCCAG
G
CTTCGCTCTATCTTCCCAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAAAGAGCGCCCAGAGATC
TCT
CTTCCTTCAGACTTTGAGCATACGATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTCACTCCAG
AT
CTCTATGGCTCACAGATGTGCCCAGGGAAGCTCCCAGAGGGAATTCCAGAGCAATGGGCACGATTACT
C
CAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACAAGCTGTTCTAGATGTTCTCAAATTC
TAT
GATTCCAAAGAAACAGTCAACAACCAGAAATACATGAGCTTTACATCAGGAGATAAAAGTGCACATG
GA
TACATAGCAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGCCTCCATTGGCCCCTCCTGTGTCTGA
A
GAAGAAGATGAAGAGGAAGAAGAAGAAGAAGATGAAAATGAGCCACCACCAGTTATCGCACCAAGACCA
GAG
CATACAAAATCAATCTATACTCGTTCTGTGGTTGAATCCATTGCTTCACCAGCAGTACCAAATAAAG
AG
GTCACACCACCCTCTGCTGAAAATGCCAATTCCAGTACTTTGTACAGGAACACAGATCGGCAAAGAAA
A
AAATCCAAGATGACAGATGAGGAGATCTTAGAGAAGCTAAGAAGCATTGTGAGTGTTGGGGACCCAAAG
AAA
AAATACACAAGATTTGAAAAAATTGGTCAAGGGGCATCAGGTACTGTTTATACAGCACTAGACATTG
CA
ACAGGACAAGAGGTGGCCATAAAGCAGATGAACCTTCAACAGCAACCCAAGAAGGAATTAATTATTAA
T
GAAATTCTGGTCATGAGGGAAAATAAGAACCCTAATATTGTTAATTATTTAGATAGCTACTTGGTGGGT
GAT
GAACTATGGGTAGTCATGGAATACTTGGCTGGTGGCTCTCTGACTGATGTGGTCACAGAGACCTGTA
TG
GATGAAGGACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAGCTTTGGATTTCCTGCACTCAAACCA
G
GTGATCCATAGAGATATAAAGAGTGACAATATTCTTCTCGGGATGGATGGCTCTGTTAAATTGACTGAC
TTT
GGGTTCTGTGCCCAGATCACTCCTGAGCAAAGTAAACGAAGCACTATGGTGGGAACCCCATATTGGA
TG
GCACCTGAGGTGGTGACTCGAAAAGCTTATGGTCCGAAAGTTGATATCTGGTCTCTTGGAATTATGGC
A
ATTGAAATGGTGGAAGGTGAACCCCCTTACCTTAATGAAAATCCACTCAGGGCATTGTATCTGATAGCC
ACT
AATGGAACTCCAGAGCTCCAGAATCCTGAGAGACTGTCAGCTGTATTCCGTGACTTTTTAAATCGCT
GT
CTTGAGATGGATGTGGATAGGCGAGGATCTGCCAAGGAGCTTTTGCAGCATCCATTTTTAAAATTAGC
C
AAGCCTCTCTCCAGCCTGACTCCTCTGATTATCGCTGCAAAGGAAGCAATTAAGAACAGCAGCCGCTAA


Translation (559 aa):
MSDGLDNEEKPPAPPLRMNSNNRDSSALNHSSKPLPMAPEEKNKKARLRSIFPGGGDKTNKKKEKERPEI
S
LPSDFEHTIHVGFDAVTGEFT
PDLYGSQMCPGKLPEGIPEQWARLLQTSNITKLEQKKNPQAVLDVLKF
Y
DSKETVNNQKYMSFTSG
DKSAHGYIAAHPSSTKTASEPPLAPPVSEEEDEEEEEEEDENEPPPVIAPRP
E
HTKS
IYTRSVVESIASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDEEILEKLRSIVSVGDPK
K
KYTRFEKIGQ
GASGTVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG
D
ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRE
CLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTD
F
GFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR
ALYLIA
T
NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ
HPFLKLAKPLSSLTPLIIAAKEAIKNSSR



Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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