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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS48334.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
48334.1 |
Public |
Mus musculus |
1 |
Relch |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 48334.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000190501.6 |
ENSMUSP00000141162.1 |
Accepted |
alive |
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NCBI |
NM_029349.2 |
NP_083625.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_083625.1 |
1192 |
Q148V7-2 |
1192 |
99.9161% |
0 |
1 |
Chromosomal Locations for CCDS 48334.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3579 nt): ATGGCGGCGATGGCGCCCGGAGGTGGTGGCAGTGGTAGCGGAGTAAATCCTTTCCTCAGTGATTCGGATG AGGACGACGACGAGGTAGCGGCAACCGAGGACCGGCGGGCAGGACTTCGGCTGGGTGCCGGGGTCGGCCT AGATCCTGGTTCTGCAGGCTCCCTGTCGCCACAGGACCCCATGGCCCTGGGAAGCAGCGCGCGGCCGGGG CTCGCTGTGGAGATGTCCGCCGCCCCGGCGGCTCCGGGGGGCAGCGGGGAGACCCCTGCCCGATTGTCAA TCGATGCCATCGCCGCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCCCTGGAGCTGCACACCGAGCT GTTGGAGAGCGGCCGCGAGCTACCACGACTGCGCGATTACTTCTCCAATCCTGGCAACTTCGAGAGGCAG AGTGGGACCCCCCCAGGGATGGGGGCGCCCGGGATCCCTGGCGCCTCCATCGTCGGAGGCGCTGGAGGTC GGGAACCGAGTACGACGTCGGGCGGAGGACAGCTCAATCGAGCTGGGAGCATTAGTACTCTTGACTCATT AGACTTTGCAAGATATTCAGATGATGGTAACAGGGAAACAGATGAAAGAGTGGCGGAACATGAAGTTCCT TTACAGGAACGAAAAAATTATAAATCAAGTCCTGAAATTCAGGAGCCAATCAAACCTCTTGAAAAGAGAG CTCTCAACTTCCTAGTCAATGAGTTTTTGTTAAAGAATAACTACAAGCTTACATCAATAACCTTTTCAGA TGAAAATGATGATCAGGATTTTGAATTATGGGATGATGTAGGATTAAACATTCCCAAACCCCCAGACTTG TTACAACTTTACCGAGACTTTGGAAATCATCAAGTGACTGGGAAAGATCTTGTGGATGTGGCCAGTGGAG TAGATGAAGATGAATTAGAGGCTCTTACACCAATTTTAGGCAACGTCCCTCCAACCCTTGATACTCCCCT GCCTATAGAGAACACCTTGCTAGTACAGAAATTAGAAGATAAAATTAGTTTATTAAATAATGAAAAATGG TCATTGATGGAGCAAATCAGAAGGCTTGAAAGTGAGATGGACATCCTCAAAGCTGAACACTTTGCCACCC CAGCAGTTGGTGATTCTGTTCAGCCTTCCTTGGTTTGGTCTTCCCAAAAGGATTCTGAAGACAATAGACA AAGCCCAGCTGTAAATAGTTCAGACCAGGAAAAAACCAAGGATGTTCATCTTGAAATACCAGATGCAGCT GATTCCTTTATTCCTAAAGAGAATTCGTCAGGTTCTTTCCCCAGGAAGGAAAGAGAAGAGCTGCCACCTT CTTCTGTATCAAATAAAACCACGCTCCATTTCGATCAGCCCAATAGGAAATTGTCACCTGCTTTCCACCA AGCACTACTCTCTTTTTGTCGAATGTCAGCAGATAGTCGGTTAGGATCAGAGGTGTCTAGGATTGCAGAC AGTGAAAAAAGTGTTATGTTAATGCTGGGACGCTGCCTGCCACACATTGTTCCTAATGTGCTGTTGGCAA AAAGAGAGGAGTTGATTCCTCTCATATTGTGTACAGCATGCCTGCACCCTGAACCTAAAGAAAGAGACCA GCTCCTCCATATCCTCTTCAACCTGATCAAGAGGCCAGATGATGAGCAAAGGCAAATGATACTGACAGGA TGTGTGGCATTTGCACGTCATGTTGGACCAACACGTGTGGAGGCTGAACTTTTACCTCAGTGTTGGGAAC AGATTAATCACAAATATCCAGAAAGACGACTGCTCGTGGCAGAGTCCTGTGGAGCATTGGCACCTTACCT TCCTAAAGAAATCCGTAGTTCCCTGGTTCTTTCAATGTTGCAACAGATGTTAATGGAAGATAAGGCTGAT TTGGTAAGAGAAGCTGTGATTAAAAGCCTGGGTATCATTATGGGCTACATTGATGATCCTGACAAATATC AACAGGGCTTTGAATTGTTGCTCTCTGCCCTGGGTGATCCCTCAGAAAGAGTTGTTAGTGCAACACACCA AGTATTTTTACCAGCCTATGCTGCCTGGACAACTGAACTTGGAAACTTACAGTCTCATCTTATACCTACA CTACTGAACAAGATTGAAAAGCTTCTCAGGGAAGGAGAGCACGGGCTGGACGAACACAAGCTCCACATGT ATCTTTCTGCCTTGCAGTCCTTGATCCCATCTCTCTTTGCATTAGTGCTACAGAACGCACCTTTCTCCAG CAAAGCCAAGCTGCATGGTGAAGTACCACATATTGAAGTGACTAGGTTCCCTCGGCCTATGTCACCTCTG CAAGATGTGTCTACTATTATTGGAAGTCGTGAGCAATTGGCAGTGCTACTACAACTTTATGATTACCAAC TGGAACATGAAGGCACAACAGGCTGGGAGAGTTTACTCTGGGTTGTCAATCAATTGTTGCCACAGCTTAT AGAAATAGTGGGCAAAATTAATGTAACCTCAACTGCCTGTGTCCATGAATTCTCCAGATTTTTCTGGCGT CTTTGCCGGACATTTGGCAAAATTTTTACAAACACTAAGGTAAAACCCCAGTTCCAAGAGATTTTAAGAC TCTCTGAAGAAAATATTGATTCCTCAGCAGGAAATGGGGTCCTCACTAAAGCTACTGTCCCCATTTATGC AACAGGAGTCCTCACGTGTTACATTCAGGAAGAGGACCGAAAGCTGTTAGTTGGCTTCTTGGAAGATGTG ATGACACTGCTTTCACTGTCTCATGCTCCTCTTGACAGCCTGAAGGCTTCTTTTGTGGAACTTGGTGCAA ACCCGGCCTATCATGAGCTGCTGCTAACTGTTCTGTGGTATGGTGTTGTTCATACTTCTGCACTTGTCAG GTGTACTGCTGCTAGGATGTTTGAGCTGTTGGTGAAGGGGGTGAATGAGACTCTGGTAGCTCAGAGGGTT GTTCCTGCTCTCATTACTCTCTCCAGTGACCCTGAAATCTCTGTCAGGATTGCTACAATCCCAGCATTTG GCACTATTATGGAAACAGTTATTCAGAGAGAGTTGCTAGAAAGAGTGAAGATGCAGTTGGCTTCTTTCCT GGAAGACCCTCAGTACCAAGACCAGCATTCTTTGCATACAGAGGTCATCCGAACATTTGGCAGAGTCGGG CCTAATGCAGAACCCCGGTTCCGAGATGAGTTTGTTATACCACATTTACATAAATTAGCCTTGGTGAACA ACTTACAAATTGTAGATTCGAAAAAACTGGACATTGCGACTCATCTTTTTGAAGCCTACAGTGCACTCTC CTGTTGTTTCATTTCAGAGGATTTAATGGTAAATCACTTCTTACCTGGCCTCAGATGTTTACGGACTGAC ATGGAACATCTGTCTCCAGAACATGAGGTTATTTTAAGTTCCATGATAAAAGAATGTGAACAAAAAGTAG AAAACAAGACTGTCCAAGAGCCTCCAGGCTCAATGTCAATTGCTGCAAGTTTAGTGAGTGAAGACACAAA GACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGCTGGCCAATGTGTTTCAGAGA AAGAAGTAG
Translation (1192 aa): MAAMAPGGGGSGSGVNPFLSDSDEDDDEVAATEDRRAGLRLGAGVGLDPGSAGSLSPQDPMALGSSARPG LAVEMSAAPAAPGGSGETPARLSIDAIAAQLLRDQYLLTALELHTELLESGRELPRLRDYFSNPGNFERQ SGTPPGMGAPGIPGASIVGGAGGREPSTTSGGGQLNRAGSISTLDSLDFARYSDDGNRETDERVAEHEVP LQERKNYKSSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTSITFSDENDDQDFELWDDVGLNIPKPPDL LQLYRDFGNHQVTGKDLVDVASGVDEDELEALTPILGNVPPTLDTPLPIENTLLVQKLEDKISLLNNEKW SLMEQIRRLESEMDILKAEHFATPAVGDSVQPSLVWSSQKDSEDNRQSPAVNSSDQEKTKDVHLEIPDAA DSFIPKENSSGSFPRKEREELPPSSVSNKTTLHFDQPNRKLSPAFHQALLSFCRMSADSRLGSEVSRIAD SEKSVMLMLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHILFNLIKRPDDEQRQMILTG CVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPYLPKEIRSSLVLSMLQQMLMEDKAD LVREAVIKSLGIIMGYIDDPDKYQQGFELLLSALGDPSERVVSATHQVFLPAYAAWTTELGNLQSHLIPT LLNKIEKLLREGEHGLDEHKLHMYLSALQSLIPSLFALVLQNAPFSSKAKLHGEVPHIEVTRFPRPMSPL QDVSTIIGSREQLAVLLQLYDYQLEHEGTTGWESLLWVVNQLLPQLIEIVGKINVTSTACVHEFSRFFWR LCRTFGKIFTNTKVKPQFQEILRLSEENIDSSAGNGVLTKATVPIYATGVLTCYIQEEDRKLLVGFLEDV MTLLSLSHAPLDSLKASFVELGANPAYHELLLTVLWYGVVHTSALVRCTAARMFELLVKGVNETLVAQRV VPALITLSSDPEISVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEVIRTFGRVG PNAEPRFRDEFVIPHLHKLALVNNLQIVDSKKLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTD MEHLSPEHEVILSSMIKECEQKVENKTVQEPPGSMSIAASLVSEDTKTKFLNKMGQLTTSGAMLANVFQR KK
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